| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1736 |
|---|
| Symbol | |
|---|
| ID | 5539214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 2231121 |
|---|
| End bp | 2232071 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640893875 |
|---|
| Product | mevalonate kinase |
|---|
| Protein accession | YP_001431846 |
|---|
| Protein GI | 156741717 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1577] Mevalonate kinase |
|---|
| TIGRFAM ID | [TIGR00549] mevalonate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCTC ACACATCCGC TCCTGGCAAA ATCATCCTGT GCGGCGAGCA TGCCGTCGTC
TACGGTCGTC CGGCAATTGC GCTGCCGCTC AGCAAGATTC GCGCACGCGC CAGCGTCGCT
CCGGGCGCAG CGGGGATTGG CATTCGCTTC GACGCACCCA ACCTGGGGCG GCGCTGGCTG
CTTGCCGCCG CTCCCGGCGA TCCCCTCTCC GAACTGACGC TGGCGACCCT CAAACAGTTG
GGGATAACCA GAATACCAGA CATCCAGATC ACGATCACGT CAGATATCCC TATTGCGAGC
GGCATGGGGA GCGGCGCTGC GATTGCAACG GCTATCGTGC GCGCACTGGC TACGGCGTTC
GGACGCAACC TGAGCGCCGC CGAGATTTCG GCGCTGGTGT ACGCAAGTGA GCAGCGCTAC
CATGGCACAC CCAGCGGCAT CGACAACACC GTGATCGCAT ACGAGCAGGC AATCTGGTTC
CAGCGACGCA GCGAGCCGCC ACACCTGATC GAGCCGTTGC CGATTGCTGC ACCCTTCACC
CTGGTGATCG GCGACACGGG TGTGCGCAGC GCCACGCGCC TGCCGGTCGG CGAGGTACGG
CGGCGCTGGC AGGAAGACCC GGCGCGCTAC GAAGCCCTGT TCGATCTGGT GGCAGATGTG
GTGCATCAGG CGCGTCACGC GCTGGCACGA GGCGATGTGG CAACCCTGGG ACCGTTGCTC
GACCGCAACC AGGAGGCGCT GGAACAGATC GGCGTATCGT CACCGGAACT CGAGCGACTG
ATCACGGCGG CGCGCAGGGC GGGGGCGGCG GGCGCCAAAC TCTCCGGCGG TGGATGGGGC
GGCGTGATGA TCGCCCTGGT TGACCCTGAA ACCGTGGTGT CGGTGCGTGA GGCGCTGCTG
GCAGTCGGCG CCGCGCGGGT GTTGGAAACC ACCGTCAGCG CATCCGCCTG A
|
|---|
| Protein sequence | MQSHTSAPGK IILCGEHAVV YGRPAIALPL SKIRARASVA PGAAGIGIRF DAPNLGRRWL
LAAAPGDPLS ELTLATLKQL GITRIPDIQI TITSDIPIAS GMGSGAAIAT AIVRALATAF
GRNLSAAEIS ALVYASEQRY HGTPSGIDNT VIAYEQAIWF QRRSEPPHLI EPLPIAAPFT
LVIGDTGVRS ATRLPVGEVR RRWQEDPARY EALFDLVADV VHQARHALAR GDVATLGPLL
DRNQEALEQI GVSSPELERL ITAARRAGAA GAKLSGGGWG GVMIALVDPE TVVSVREALL
AVGAARVLET TVSASA
|
|---|
| |