Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1721 |
Symbol | |
ID | 5539199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2216131 |
End bp | 2217243 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640893860 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001431831 |
Protein GI | 156741702 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCGT TGACAGAAAT CATTCTCATT GCAATGGTCA CTGCGGTCGC CTGCGCTCTG CCCGGCGCCT TTCTGGTCTT GCGTCGGGTG GCGATGATCA GCGACGCCAT CACGCACACA GTTCTGTTGG GCATTGTTCT GGCATTCTTT GTTGTGCGCG ACACAACCTC GCCACTCCTT GTGATGGCTG CTGCAACCGC AGGTGTGGCG ACGGTTGCCC TGATCGAACT TTTGAACCAA ACGGGACGGG TACGCGAAGA CGCCGCGATT GGGCTGGTTT TCCCGTTTCT GTTCAGTATT GCAGTCATTC TGATCGCACA GTATGCCGGG AATGTTCATC TCGATGTCGA TGCCGTGTTG CTTGGCGAAC TGGCGTTCGC GCCACTCGAC CGATATACCC TGGGGGATAT CGATCTGGGA CCGCGGGCGC TCTGGTTGAT GAGCGGCATT CTGGGCATGT CGCTGCTGTT GCTCATCCTG TTCTACAAAG AGCTGAAACT GGCGACCTTC GATGCGGCGC TGGCGGCAAC GCTCGGATTC ATGCCCACGG CGCTGCACTA CGGGCTAATG AGCGTTGTAT CACTGACGGC AGTGGGGGCA TTCAACGCCG TCGGTTCGGT GCTGGTCGTC GCGTTGATGG TGGCGCCACC CGCCGCCGCC TATCTGCTTA CTGATCGTCT GTCGCACATG CTGGCGTTGA GTGCCATCTT TGGCGCGCTG GCAGCAATCC TGGGATGTGC GGCTGCGTTT GTGCTCGACA CATCGCTCGC CGGCGCCATG GCGGTCGTCA GCGGACTGAT CTTTGGCGTG GCGTGGGTGT TTGCCCCCGA ACGCGGTCTG GTCGCGCAGG CGTTGCGCCA TGCCCGCCAG CGCCAGGAAT TTGCGCAGGC GATGCTGCTG GTGCACCTGC TCCACCACGA AGCAACGCCA CAAGCCAGGG TTGAATGTCA TCCATCACAT CTCAGCGAAC ATTTGCGCTG GAATGCGGCA TTTACCACAC AGATCCTGCA TCGCGCGGAA CAGCACGGTC TGCTGGAGCG ACAGAGGGAC CTGATCGTGC TGACGGAGAG CGGAAGGCGT CTCGCAGTGC AGACGCTTGG CGGGGAGGGA TGA
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Protein sequence | MSPLTEIILI AMVTAVACAL PGAFLVLRRV AMISDAITHT VLLGIVLAFF VVRDTTSPLL VMAAATAGVA TVALIELLNQ TGRVREDAAI GLVFPFLFSI AVILIAQYAG NVHLDVDAVL LGELAFAPLD RYTLGDIDLG PRALWLMSGI LGMSLLLLIL FYKELKLATF DAALAATLGF MPTALHYGLM SVVSLTAVGA FNAVGSVLVV ALMVAPPAAA YLLTDRLSHM LALSAIFGAL AAILGCAAAF VLDTSLAGAM AVVSGLIFGV AWVFAPERGL VAQALRHARQ RQEFAQAMLL VHLLHHEATP QARVECHPSH LSEHLRWNAA FTTQILHRAE QHGLLERQRD LIVLTESGRR LAVQTLGGEG
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