| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1675 |
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| Symbol | |
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| ID | 5539151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2156175 |
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| End bp | 2156561 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893812 |
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| Product | PilT domain-containing protein |
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| Protein accession | YP_001431785 |
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| Protein GI | 156741656 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000215959 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCAAC CGATACGCGC GTCCCTGCTC GATACCGACA TTCTCTCGGC AGTGATGCGC
CAGCACCCCG TTGCGTTGGC GAGGGCCCGT GCGTATCTGG GGGTGCATCA CCGCCTGACG
TTCTCCATGC TTACCCGTTA CGAAATCCTC CGTGGCTTAT ACGCGAAGCA CGCGACCGCC
CAACTGGTCG CCTTTGATCG GCTCTGTAGC GTCAGCGCCA TTCTGCCGCT CACGGATGCA
ATCGTGGTGC GCGCCGCCGC CATCTATGCC GATCTGCATC AGCGGGGCGC CTTAATCGGG
GATGCTGACA TCCTGATCGC GGCAACTGGT CTCGAACACG GGCTGGTGGT GGTCACCAAC
AACGCGAGTC ACTATCAGCG GTGCTGA
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| Protein sequence | MSQPIRASLL DTDILSAVMR QHPVALARAR AYLGVHHRLT FSMLTRYEIL RGLYAKHATA
QLVAFDRLCS VSAILPLTDA IVVRAAAIYA DLHQRGALIG DADILIAATG LEHGLVVVTN
NASHYQRC
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