| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1587 |
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| Symbol | |
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| ID | 5539063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2039956 |
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| End bp | 2040855 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893725 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_001431698 |
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| Protein GI | 156741569 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCCG ATGATCGCCC GATAGGACGC ATTCTTACCC GGCGCGAAGT GCTGGCGCTG
CTCGGCATAT CTGCCGCTAC GCTGCTGACC GGCTGCGGCG CAGCCGCAGA AACGCCGGCC
AGCAATGCGC CTGCCGCCTC GCCGGTACAG CCCGACACGC CTGCCACGTT CGCTGCGCAG
CCGGAACTAT CACCGGTTGC GACACCGGCG CCAACCGCCA CCCCGATTGA ATCATCAGTG
ATTGCAACAA CTGTGCCGAC AGCCAGCCCC GCGGCTATCG GCAGCAGGCC GGTTCCGGCG
TGCGTGGTGC GCCCTGAACA GACGGAGGGA CCATATTTTG TCGATACCCA ACTGAACCGT
TCCGATATTC GTTCCGATCC CGCGAGCGGC GTGGTCAAAG AGGGATTGCC GTTGCTGCTC
ACCTTCGTTG TCAGCCAGGT TGGCAGCGCC GGCTGCGCGC CACTTAGTGG CGCACTGGTG
GACATCTGGC ACTGCGATGC CCAGGGGGTC TATTCCGGTG TGCGCGATCC TCGCATCGAC
ACGCGCGGGC AGCAGTGGCT GCGCGGTTAT CAGATGACCG GCGCCGATGG CGTGGCGACC
TTCACGACTA TTTATCCCGG TTGGTATCCG GGACGCACCG TTCATATCCA TTTCAAGATT
CGCGCAACGA ATGCCGCCGG GCAGGTCTAC GACTTTACCT CGCAACTCTA CTTTGACGAC
GCCATCAGCG ATGCCGTATT TGCGCAAGCA CCCTACGCAG ACCGGGGACG TCGCGCGACC
CTTAATCAGA ACGATAGCAT TTTCCGGCAG AGCGGCAGTC AGTTGATGCT GAACCTGACC
CCGCTCGACC AGGGGTATGC GGCGACTTTC GAGATTGGGG TGGATTTGGG TGAGGGGTGA
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| Protein sequence | MDADDRPIGR ILTRREVLAL LGISAATLLT GCGAAAETPA SNAPAASPVQ PDTPATFAAQ
PELSPVATPA PTATPIESSV IATTVPTASP AAIGSRPVPA CVVRPEQTEG PYFVDTQLNR
SDIRSDPASG VVKEGLPLLL TFVVSQVGSA GCAPLSGALV DIWHCDAQGV YSGVRDPRID
TRGQQWLRGY QMTGADGVAT FTTIYPGWYP GRTVHIHFKI RATNAAGQVY DFTSQLYFDD
AISDAVFAQA PYADRGRRAT LNQNDSIFRQ SGSQLMLNLT PLDQGYAATF EIGVDLGEG
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