| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1585 |
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| Symbol | |
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| ID | 5539061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2035612 |
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| End bp | 2037090 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893723 |
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| Product | zeta-phytoene desaturase |
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| Protein accession | YP_001431696 |
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| Protein GI | 156741567 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGGG TTATCATTAT CGGAGCCGGT TTTGGCGGCC TGGCTGCCGC TGTGCGCCTG
GCAGCGCGCG GTCATGAAGT CGAAATCTTT GAGAAGCAGG ACAAACCGGG CGGGAAGGCG
TATGTGCTGG AAGTGGATGG CTTTCGGTTC GATACCGGTC CAACCGTGAT CACTGCGCCA
TTCCTGTTCG ATGACCTGTG GCGTGCTGTG GGGCGTCGCC GTGAGGAATA TGTCGAATTT
CGCCCATGCC ATCCCTTCTA TCGCATCTAT GACGATACCG GTCGCCACTT CGATCACAGC
GCCGATGAAG CCGCAGTGCT GCGTGAAATC GAGCGGATCA ATCCCGCCGA TGTCGAAGGG
TACCGCCGTT TTCTGGCGAG CACCCGCCCG ATTTTCCAGA AGGGATTTAT CGAGCTGGCG
GATCAGCCGT TCCTGCGCTT CCGCGACATG CTGCGCGTTG CGCCCGATCT GGCGCGCCTG
CGCTCGTTCG AGAGCGTCTA TCGCTATGTG TCGCGTTACA TTAAGGACGA TTTTCTGCGT
CGTTGCTTTT CGTTCCATCC GCTGTTCATC GGCGGCAACC CGTTCTATGC CTCGTCGATC
TACGCTATGG TGCACTACCT GGAACGCGAG TGGGGCGTCT ACTACGCGGT CGGCGGAACC
GGCGCGATTG TCGATGCGAT GGTGCGGTTG CTGCGCGAAC TTGGCGTCGC TATCCACCTG
AATGCTGAGG TGCGTGAACT GATCGTTGAG GGACGGCGCA TTCGCGGCGT GGTGCTGGCT
GATGGCAGTG TGCGCCGCGC TGACATCGTG GTGTCGAACG CCGATGTCGC GCATACCTAC
GCCGACCTGA TTGCGCCGCG CTATCGCCGC CGCTATACCG ACCATCGTCT GCGGTCGTTG
CGCTACAGTA TGTCGCTGGT GGTCATCTAC CTTGGAACAC GGCGCACCTA CCACGATGCG
CCGCTGGTGC GGCACACTAT CATTTTTGGT CCGCGCTACC GGGGATTGCT CGACGATATT
TTCATTCATA AACGGGTCGC CGACGACTTC TCGCTCTACC TGCATATGCC GTCGCGCGAT
GAGCCGGATG TGGCGCCGCC CGGTTGTGAC GCCTTCTACG TTCTTTCGCC CGTCCCCAAT
CTGGCGTCGC AGACGGATTG GGCGACACTG GCGCACCCAT ACCGCGACGC GATCATTGGG
TTCCTGGAAG CGCGATTTCT GCCCGATCTA CGCAAAAACA TTGTGGTGGA ACGGATGGTC
GATCCGCGCC ACTTTCAGCG CCGCCAGAAC AATTACCTTG GCGCGGCGTT CGCGCTCGAA
CCGACGCTGC TGCAATCTGC ATGGTTCCGT CCCCACAATC GCTCCGAAGA GTTCGAAAAC
CTCTATTTCG TCGGCGCGGG CACCCATCCG GGCGCAGGGT TGCCGGGTGT GTTATCATCG
GCGCTGATTG TCGAACGGTT GGTGTCGCAT AGATGTTGA
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| Protein sequence | MSRVIIIGAG FGGLAAAVRL AARGHEVEIF EKQDKPGGKA YVLEVDGFRF DTGPTVITAP
FLFDDLWRAV GRRREEYVEF RPCHPFYRIY DDTGRHFDHS ADEAAVLREI ERINPADVEG
YRRFLASTRP IFQKGFIELA DQPFLRFRDM LRVAPDLARL RSFESVYRYV SRYIKDDFLR
RCFSFHPLFI GGNPFYASSI YAMVHYLERE WGVYYAVGGT GAIVDAMVRL LRELGVAIHL
NAEVRELIVE GRRIRGVVLA DGSVRRADIV VSNADVAHTY ADLIAPRYRR RYTDHRLRSL
RYSMSLVVIY LGTRRTYHDA PLVRHTIIFG PRYRGLLDDI FIHKRVADDF SLYLHMPSRD
EPDVAPPGCD AFYVLSPVPN LASQTDWATL AHPYRDAIIG FLEARFLPDL RKNIVVERMV
DPRHFQRRQN NYLGAAFALE PTLLQSAWFR PHNRSEEFEN LYFVGAGTHP GAGLPGVLSS
ALIVERLVSH RC
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