| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1575 |
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| Symbol | |
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| ID | 5539051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2022658 |
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| End bp | 2024343 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640893713 |
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| Product | cytochrome c oxidase subunit I |
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| Protein accession | YP_001431686 |
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| Protein GI | 156741557 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.2486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACAG CGCGTGTTTC TGGCGTTTCT GTCGCTGCCG AACGCGCCGA AGTCGGCGTG
TTTGCCACGG AGTATCGCCT GACAGGGCTG AACCTGCTGA TTGCATTCAT TGCGCTGGCA
ATCGGCGGTC TGTTTGGCGT GATGCAGGCG CTCCAGTACA ATGGCATCGA CCTGTACAAG
CCGATTTCGC CGATCCTGCG CGGCGGGTAT TATCAGGGGT TGGCGCTGCA CGGCGTGCTC
AATGTGCTGG TCTTTACCAC GTTCTTCATT ATTGGCTGGT TGACGTTCGT CACCTCGCGG
TCGCTGGGTA TTCCTCTGGC GAGCCGCACC CTTGGCTGGA CGACGTTCGG CGTGATGACC
GGCGGTTTGC TCATTGCTGC ACTGCCGCTG CTGCTCAATA ATGCGACGGT GCTCTTTACC
TTCTACCCGC CGCTCAAGGC GGATCCGCTC TTCTACATCG GTCTGACGCT GGTGGTCGTC
GGCACCTGGT TGCTGCTCAT CAACCAGGTG ATGATGCTGC GGCAGTGGCG CGCCGCCAAT
CCCGCAGCGC GCATTCCGCT CCCGGCGTTT ATGGCGATTG TTACAATGAC GATGTGGGTG
ATCTGCACCT TTGGCGTTGC GACGGAGATG CTCTTCCTGT TGATTCCATG GTCGCTGGGG
CTGGTGCAGG GAACCGACCC GGTGCTGGCG CGCACGCTCT TCTGGTTTAC CGGGCACCCA
ATCGTCTACT TCTGGTTGTT GCCCGCCTAT ATTTCGTGGT ACAACTTCGT GCCGCAGCAG
GCAGGCGGGC GATTGTTCAG CGACCCGATG GCGCGCGTGT CGTTCATTCT GTTCCTGATC
CTTTCGACAC CGATCGGGAT GCACCACCAG TACACTGACC CTGGCATCAG CGAGATCTGG
AAACTGGTGC ATGCCATCTT CACCTTTGGC GTCTTCTTCC CCAGTCTGCT GACCTTCTTC
AATGTCGTGG CATCGCTCGA AAATGGCGGG CGGGCGCGCG GTGGCAAGGG GTGGCTGGTG
TGGGTCTTCA ACCTGCCGTG GCGTGAACCA AGCTTCACGA CGCAGGCGCT GGCGATGATT
CTGTTCGCTT TTGGCGGCGC CGGCGGGTTG ATCAATGCGT CGTACAATAT CAACCTGGTG
GTGCATAACA CTTCCTGGAT TTCGGGGCAC TTCCATCTGA CGGTCGGTAC GGCGGTGACG
CTCAGTTTCA TGGGGATCAC CTACTGGCTC GTGCCGCATC TCACCGGGCG AAGGCTGTGG
AGTCCGACGA TGGCGCTGGT GCAGGCGTGG ACCTGGTTCG TCGGTATGGG GATATTCTCG
CACTGGATGC ATACGCTGGG GTTGTTGAGT ATGCCACGGC GCACCGCGAT TGGCGCTATG
CGTGAACTGC ATCCCGAATG GGAACCGCTC CTGCCAATTA TTGCGGTTGG CGCGCTCATC
ATGTTCGTCA GCGCCATTCT GTACTATCTC AATATTGTGC TGACGATTAC TGCCGGGAAG
AAAGACACGG TTCCAATGGT TCCGTTCGCG CGAGCGGTGT CTGGTCCCGA AGATGGTCCG
CGCTGGTTGG ATAACTTCAA GCCCTGGCTG GCGATTGCGT TCGCTCTGAT TGTGGTCAAT
TATACGCCAA CGCTGATCAG GCTGGTGTCG GAGATGCAGT TCATTCCGGG TATTCGTTCC
TGGTAG
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| Protein sequence | MATARVSGVS VAAERAEVGV FATEYRLTGL NLLIAFIALA IGGLFGVMQA LQYNGIDLYK
PISPILRGGY YQGLALHGVL NVLVFTTFFI IGWLTFVTSR SLGIPLASRT LGWTTFGVMT
GGLLIAALPL LLNNATVLFT FYPPLKADPL FYIGLTLVVV GTWLLLINQV MMLRQWRAAN
PAARIPLPAF MAIVTMTMWV ICTFGVATEM LFLLIPWSLG LVQGTDPVLA RTLFWFTGHP
IVYFWLLPAY ISWYNFVPQQ AGGRLFSDPM ARVSFILFLI LSTPIGMHHQ YTDPGISEIW
KLVHAIFTFG VFFPSLLTFF NVVASLENGG RARGGKGWLV WVFNLPWREP SFTTQALAMI
LFAFGGAGGL INASYNINLV VHNTSWISGH FHLTVGTAVT LSFMGITYWL VPHLTGRRLW
SPTMALVQAW TWFVGMGIFS HWMHTLGLLS MPRRTAIGAM RELHPEWEPL LPIIAVGALI
MFVSAILYYL NIVLTITAGK KDTVPMVPFA RAVSGPEDGP RWLDNFKPWL AIAFALIVVN
YTPTLIRLVS EMQFIPGIRS W
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