Gene Rcas_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1571 
Symbol 
ID5539047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2020440 
End bp2020757 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content53% 
IMG OID640893709 
Producthypothetical protein 
Protein accessionYP_001431682 
Protein GI156741553 
COG category[R] General function prediction only 
COG ID[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.187436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACGG AAGAATTGGT GCGCAGCGCG CTGAAGAATG TCTATGACCC CGAAATTGGG 
ATGGATATCG TCAATCTGGG GCTGGTCTAC AATATCGACA TTCAGGAGGG TGGTCGGCGT
GTGGTGGTCG ATATGACCCT GACGACTCCC GCCTGCCCGG CCGGACCGCA GATTCTCACC
CAGGCAAAAC GTGAGATCGA GAGTCTCAAT CAGGTGTACA GCAATCTGGA AGATGTGCAG
ATCAACCTGG TTTGGACTCC GTTCTGGAAC CCTTCGATGA TGAGTGAGGA GGCGCGCGAA
GAGTTGGGGT TTTTCTAA
 
Protein sequence
MITEELVRSA LKNVYDPEIG MDIVNLGLVY NIDIQEGGRR VVVDMTLTTP ACPAGPQILT 
QAKREIESLN QVYSNLEDVQ INLVWTPFWN PSMMSEEARE ELGFF