| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1533 |
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| Symbol | |
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| ID | 5539009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1954822 |
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| End bp | 1955847 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640893671 |
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| Product | fatty acid desaturase |
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| Protein accession | YP_001431644 |
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| Protein GI | 156741515 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3239] Fatty acid desaturase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000066309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0056563 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCTTCAG TCAGCAACGC AGAGTACATC GCACTCAAGA AACTCATCAA GGAACGCGGT
CTGCTCGATA AGCAACCCTG GTTTTTCATT GGCGTCATTG CGCTCAAGGT CGGTATGCTC
GTAGCCAGCA TCATTATCCT GTTTTTGGTC GATAATCTCT GGATTCAGGC GTTGAACGCA
ATTTTCATGG GATTTGTCCT GGCACAGATC GGGTTTACGT CACATAGCGC CTGCCATCGG
CAGATTTTTC ACAAAGTCGG TTGGAACGAT GTGGTTGGCA TCTTTCTGGG CAACCTGCTG
CTGGGATTGA GCGCCGAATG GTGGACCGGC AAGCACAATG CGCACCATGC GCATCCGAAC
CACGATGGAA TGGACCCCGA CCTGGACGTG CCGGTGGTGG CGTTCACGCC GGAGCAGGCG
GAGTCGCGTC GCGGCATCTG GCGCTGGATG GTGAAGCATC AGGCGTTTCT TTTCTTTCCG
CTGCTCACAT TGCAGGGATA CGCGCTGCGC GAGGTCAGTT ATCGCTTTGT GCTGAGTCCT
GAGTCGCGGC GGCGCGGCAT CGAGATTGCG ATGATGGCGC TCAACCTGGT CTGGTATCCG
ACGTTGCCGA TTCTTGCGCT GGGACCGGTG GCAGGGATCG GGTTCATTCT GATCAGTCAG
GCGTTCTTTG GCGTGTACCT GGGGTCGGTC TTTGCGCCCA ATCACAAAGG GATGCTGATT
GTCGATGACA ATACGCAGAT CGACTTTTTG CGCCTGCAAG TGCTGACGGC GCGCAATGTC
AGCGGGCATC CGATTACCGA CTTTTGGTAC GGCGGTCTGA ACTATCAGAT CGAGCATCAT
TTGTTCCCGT CGCTGCCGAT GCACCGGCTG CGCGAAGCGA GCATGATCGT CAAGGAGTTC
TGCGCCGGGC ACGGCATTTC GTACCACGAA ACGTCGATGA TCCAGTCGTA CCGCGAAATC
CTGGGCTATC TCCACGAAAT CGGTGCGTCG CTGCGCGCGC CGAAAGCGGT TTCGTCATCG
GTGTAG
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| Protein sequence | MSSVSNAEYI ALKKLIKERG LLDKQPWFFI GVIALKVGML VASIIILFLV DNLWIQALNA
IFMGFVLAQI GFTSHSACHR QIFHKVGWND VVGIFLGNLL LGLSAEWWTG KHNAHHAHPN
HDGMDPDLDV PVVAFTPEQA ESRRGIWRWM VKHQAFLFFP LLTLQGYALR EVSYRFVLSP
ESRRRGIEIA MMALNLVWYP TLPILALGPV AGIGFILISQ AFFGVYLGSV FAPNHKGMLI
VDDNTQIDFL RLQVLTARNV SGHPITDFWY GGLNYQIEHH LFPSLPMHRL REASMIVKEF
CAGHGISYHE TSMIQSYREI LGYLHEIGAS LRAPKAVSSS V
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