| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1525 |
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| Symbol | |
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| ID | 5539001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1943692 |
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| End bp | 1944426 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640893663 |
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| Product | LmbE family protein |
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| Protein accession | YP_001431636 |
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| Protein GI | 156741507 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.75357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0331193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CACCATTCTC TCCGCTGCGA ATCCTGGGCA TTTTTGCCCA CCCGGACGAC
CCGGAATTCA GCATGGGCGG CAGCGCCGCG CGTTGGGCGG ACGAAGGGCA CGAGGTCTAC
TACTGTATCG TGACCGACGG TTCCGCCGGC AGCAATGACC CGCACCAGGA CTTGCGCGCA
TTGGTGCGCA TTCGTGAAGA AGAACAACGC GCCGCTGCCC GCGTGCTCGG CGTGCGCGAT
GTGTTCTTTC TTGGTTACAA GGACGGCGTG CTCGAACCGA CGCTCGAACT GCGCCGTGAG
TTGACGCGCC TGATCCGCCG CCTGAAGCCG GACCGCGTCG TCTGCGGCGA TCCGACCGCG
TTCTTCTATG GCGATGAGTA CGTCAACCAT GCCGATCACC GCGCCGCCGC CGAAGCCGCT
GTCGCCGCCG TCTTCCCCAG CGCACCGACG CGCCCGATCT TCCCGGAACT GCTCGCCGAA
GGACTTGAGC CGCACCAGGT CAAAGAACTG TACATCACCT CCGATCAAGC GGGATTGTAT
ACAACATATG TGGACATATC CATGACGATC GAGCGCAAAA TCGAAGCCTT GCGCTGCCAC
GCCAGTCAGG TCCAGGTCGG CGACGGTCAA TGGCTGCGCG ATTGGGCGGC GGAGACCGGC
AAAGCCGCAG GACTGGCATA TGCCGAAGCG TTTCGGGTTA TGCGGTTGGC GCGCGAGCAT
CAGGACGGGT CATAA
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| Protein sequence | MSDTPFSPLR ILGIFAHPDD PEFSMGGSAA RWADEGHEVY YCIVTDGSAG SNDPHQDLRA
LVRIREEEQR AAARVLGVRD VFFLGYKDGV LEPTLELRRE LTRLIRRLKP DRVVCGDPTA
FFYGDEYVNH ADHRAAAEAA VAAVFPSAPT RPIFPELLAE GLEPHQVKEL YITSDQAGLY
TTYVDISMTI ERKIEALRCH ASQVQVGDGQ WLRDWAAETG KAAGLAYAEA FRVMRLAREH
QDGS
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