| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1518 |
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| Symbol | |
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| ID | 5538994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1937633 |
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| End bp | 1938196 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640893656 |
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| Product | elongation factor P |
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| Protein accession | YP_001431629 |
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| Protein GI | 156741500 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
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| TIGRFAM ID | [TIGR00038] translation elongation factor P |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0357828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGACAA CATCAGATCT GCGCACAAAT ATGATTATCC GCCATAACGG TCAGTTGCAC
CGTGTGATGG AGTTCTATCA CCACGCCCCC GGCAACTGGC GCGCAATGGT GATCATGAAA
CTGAAGAACA TTGAAACAGG CAAAACCATC GAAGAGCGGG TGCGCGCCGG TTCCGAAATC
GAGATTGTGC GCGTCGAAAA ACGTCCGATG CAGTTCCTCT ACCGCGAGGG GGACATCTAC
CACTTTATGG ATACCGAAAC CTTCGAGCAG ATCGAAGTAG CGGAAGACCT GATCGGCGAG
CCGGCGAAGT TCCTCAAAGA GAACGAAATG GCGGACATCC TGTTCTACGA CGACAATAAG
ATTCTGGGTG TCGAGCCGCC GCTGTTCGTG ACGTTGCAGG TGACAGAAGC CAGCGTTGCG
GTGCGCGGCG ATACGGCGAC GAATGTCAAC AAGCAGGTGA CGCTGGAGAC CGGTGCGGTC
ATCTCAGTGC CCGCCTTCGT CAATCAGGGC GATTATGTGC GGGTCGATAC GCGCACCGGT
GAGTATATCG AACGTATCAA ATAA
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| Protein sequence | MATTSDLRTN MIIRHNGQLH RVMEFYHHAP GNWRAMVIMK LKNIETGKTI EERVRAGSEI
EIVRVEKRPM QFLYREGDIY HFMDTETFEQ IEVAEDLIGE PAKFLKENEM ADILFYDDNK
ILGVEPPLFV TLQVTEASVA VRGDTATNVN KQVTLETGAV ISVPAFVNQG DYVRVDTRTG
EYIERIK
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