Gene Rcas_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1515 
Symbol 
ID5538991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1936166 
End bp1936450 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content61% 
IMG OID640893653 
Producthypothetical protein 
Protein accessionYP_001431626 
Protein GI156741497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.648993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00942142 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACGGCG AATACAAAAT CCCTGGAGGA AAACTGGTGG TCGTTGATCT GAACGTGGCT 
GATGGCGCAC TGCGTGATGT GGTGTTGAGC GGCGATTTCT TTCTCGAACC GGCGGAAGCG
CTGGAATGGA TGACAGCCGC GCTCGATGGT CTCCCGGCGG ACACGCCGGT CGAGACGATT
GCTGCACGGG TGCGCGACGC AGCCGCGCAC GCCGAATTAC TCGGCATTAC GCCGGAAGGA
GTTGCTGAAG CGGTACGCCG CGCGCTTCAG GGAGGTGCGC AATGA
 
Protein sequence
MHGEYKIPGG KLVVVDLNVA DGALRDVVLS GDFFLEPAEA LEWMTAALDG LPADTPVETI 
AARVRDAAAH AELLGITPEG VAEAVRRALQ GGAQ