| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1509 |
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| Symbol | |
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| ID | 5538985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1926082 |
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| End bp | 1927587 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640893647 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001431620 |
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| Protein GI | 156741491 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.377329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.352445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACGCT GGTTGATCCG CATTCGCGCC TACTTTCTCA AAGAAGTGCG CGAGATACGC
CGCCAGCCGT TGCTCCTGAT CAGCCTGGTC GCCGGTCCGC TCCTGGTGCT CGTGATCTTC
GGCGCAGGGT TCGTCAACAG CAACCCTGTG CTGCGCACCG CGCTCATTCT GCCGGACGAT
CTACCGGTTG AGTTGCGCAC TCAGATCACG GGACTGGTCG GACTCAATTT CAGGCTGGTC
AACCGCGCTT ATACCCCTGT CGAAGCGCGC GCAGCGCTGG CAAACGGCGA CCTGGACGTC
GTTCAGATCG TGCCGGACAA TGTATTCGGC AAACTGCAAC GCGGCGAGAA CCCGACTATC
CTGATCTACT CAAATGCCAT CAATCCACTC GTCGAAGGAT GGATTCAGTA CCTGGCGTAT
GCCCAGGTCA ACGAGATCAA CAAGGCGCTG CTGACGGAAC AGACCCGTCT GGCGCAGCAA
CAGGCGCGCG CTGTAGGGGT GCGGATCGCA GTTGGCGCCG AACGCCTGAC CAACCTGGAA
CGCGAGGTGA GTCGCGCCGA GCAGGAAGCG ATCCGCCAGG AATTGCGCAC CCTGCGCGCA
TTGATCGTCC AATTCCGCGA TACGATTCCG CCGGAGAGCC TGTTCGCCGG TCGCGGCGAT
GATGTCGAAC AACTGCGCGC ACGTGCCAAT GAAGCCATTC GTTCCCTCGG CGAGGTGGAA
GCCATACTGT CTTCCGGCGA CCTTGAGCGC GGGTTGGACG AACTGCGCGA CTCGAAGGAA
TTGCTGCGGC TGCTCGATCA GCAGATCGCC ATTTTCGTCA GCATCGCGCC GGAGACAATC
GTCTCTCCCG TGCAGCAACG CTACCAGAAT ATTCGCACAG AAGCGATCGG GCAGGCAAGC
GGCGCTTACC CGGCAGTGGT ATACTATGCA CCGGGCGTTC TGGCATTGCT GGTGCAGCAC
ACGGCGGTAT CGCTGGGGGC GCTGGCGCTG GTGCGTGAGC GTATGATGGG CGCCTTCGAG
TTGTTCCGGG TATCGCCCGC CAATATGGTG CAACTGCTCA TCGGCAAATA CCTTGGCTAC
ACGGTGGTCA TCGCAGTTGC ATCCGCAGCC CTTGCGGCAG CCATGCGGTT GCTCGGCGTG
CCACTCAACG GCAGTTGGCT GCTCTTCATC CTGTTGCTGC TGATGCTGAC CATCGCATCA
CTGGGGGTGG GATTTCTCAT CTCAACCGTC GCAGGGTCGG ACAGTCAGGC AATTCAGTTT
GCGATGATCA GCCTGCTTCT GTCGATCTTC TTCAGCGGCT TTTTCATCAG TCGTGACAGT
TTCGCTGCAT GGGTGGAGCC GATTATTGTG ATTATTCCGA TGAGTCACGG TGTTGTGGGG
TTTCAAGACC TGATGCTGCG CGGCATCACG CCAGAACCAG CGGTCTGGAT CGACCTGGGA
GTCATTGCCA TCGTCACGTT CGGTTTGGTT ACATTCCTGA CACAACGCCA GTTTCGCCGC
GCGTAA
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| Protein sequence | MTRWLIRIRA YFLKEVREIR RQPLLLISLV AGPLLVLVIF GAGFVNSNPV LRTALILPDD
LPVELRTQIT GLVGLNFRLV NRAYTPVEAR AALANGDLDV VQIVPDNVFG KLQRGENPTI
LIYSNAINPL VEGWIQYLAY AQVNEINKAL LTEQTRLAQQ QARAVGVRIA VGAERLTNLE
REVSRAEQEA IRQELRTLRA LIVQFRDTIP PESLFAGRGD DVEQLRARAN EAIRSLGEVE
AILSSGDLER GLDELRDSKE LLRLLDQQIA IFVSIAPETI VSPVQQRYQN IRTEAIGQAS
GAYPAVVYYA PGVLALLVQH TAVSLGALAL VRERMMGAFE LFRVSPANMV QLLIGKYLGY
TVVIAVASAA LAAAMRLLGV PLNGSWLLFI LLLLMLTIAS LGVGFLISTV AGSDSQAIQF
AMISLLLSIF FSGFFISRDS FAAWVEPIIV IIPMSHGVVG FQDLMLRGIT PEPAVWIDLG
VIAIVTFGLV TFLTQRQFRR A
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