| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1477 |
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| Symbol | |
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| ID | 5538952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1885660 |
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| End bp | 1887180 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893615 |
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| Product | trigger factor |
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| Protein accession | YP_001431589 |
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| Protein GI | 156741460 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.571552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.413399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGTCGG TGAAGGTCAC AACCGAAAAG AAACCGCGCA GTGTTCTCGA ACTGACCGTC
GAACTCGATA AAGAACAGAT CGAGAAAGCG CTGGATCGTG CGGCGCGCCG GATGTCGCAA
AAATACAACA TCCCCGGATT TCGCAAAGGC AAGGCGCCTC GTTTCATTGT TGAAAACTAT
TTTGGGCGCG AAGCTTTGCT CGAAGAAGCT TCCGATGATC TGATCCAGAA GGCGTTCCAG
GAAGCGCTCA AGCAGGAAGG GATCGAACCA TACGCACAGG CGCATCTGAC CGCCGTGAAC
CTCGACAATC CACCGTTTAA CTTTACAGTC GAAGTGCCGG TCGCGCCGAC CGTCGAACTG
CCCGACTACC GCGCCATTCG CGTGCCGTTT GAGCAGGACG CGGTGACGGA CGAGATGGTC
AATCACGCGA TGGAGCATCT TCGGGACCGT CACGTCGTGC TCCGTTCACT CGAAGAGCCG
CGCCCGGCGC AACACGGCGA TCAACTGACC GTTCAGATCG AAACGTATGT CGATGGCAAA
CTGCTCGAAT CGCGCGGAGA AGGCGAGGAA ATCCCGCAAT CCACGCTGGT GCTCGATCCT
GAACGCATCG TGCCCGGATT ATACGAGGCG CTGCTGGGCG TCTCACCAAA CACCATGGTC
GATGTGACCG TCCGCATGGC GGACGACCAC GAGAATGAGC AGGTGCGTGG CAAGGATGTG
CGCTTTGTCG TCAATGTGCT GGAGATTCAG GAGCGTCTTC TGCCGGAATG GGATGAATTG
CCGGCGTTGG AGAACTTCGA GGGGACGCTC GACGAACTGC GCGAGAAAAC ACGCCAGGAA
CTCATCGCCG CAGCGCGCAA GAGTGCTGAG GACCGCGTCT TCCTCGAATA TGTTCGCCAG
GTGGTGGCCG CTACAACCTT CGATCTGCCC GAGGCGCTGA TCGAGCGTGA GGCGGACAGC
ATCCTGCGCG AGCGCGAGGG GGAGTACGAA CGCTATGGCG TTCGTCCAGA ACAGGTCTAC
GAAGCGCAGG GCACGACGCG CGAAGCCCTG ATCGAGCGGT TGAAACCGGC AGCCGAAGAA
CGCGCGAAAC GCGGCCTCGT ACTGCGTGAG ATCGCCAGAG CCGAAGGGCT GGCGCCGGAC
GAGACGGAGA TCACGCAAGA GATTGAAGAT ATTGTGGCAA GCATGGAAGA GGAGCAGCGC
GACAGCGCGC GCATCATTCT GGGTTCGGAG TTGCGTTCGT TCGTCGCCGC CGGAATTGTG
GATCGCAAAC TGCGACGCCG TCTTCTTGCG ATTGCGACCG GCGATCCGTC GTTCGAGCAG
CAGACGACGC CCGCTGTCGC CGACGAAACC CATGAAGCCG CGGGCGCAAC GCCTGCCGCC
GAAATCGCTG AAACACCAAC GGGCGCAGTG GATTCCATCC CCGAAGCAGC GCCTGCCGTA
TCAGAAGGAA ATGACACGAT TGCGTCTACG GAAGACGGCG CTGCTGTCGA AGCGGCAGCC
CACAAACCAG GAATGGAGTA A
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| Protein sequence | MVSVKVTTEK KPRSVLELTV ELDKEQIEKA LDRAARRMSQ KYNIPGFRKG KAPRFIVENY
FGREALLEEA SDDLIQKAFQ EALKQEGIEP YAQAHLTAVN LDNPPFNFTV EVPVAPTVEL
PDYRAIRVPF EQDAVTDEMV NHAMEHLRDR HVVLRSLEEP RPAQHGDQLT VQIETYVDGK
LLESRGEGEE IPQSTLVLDP ERIVPGLYEA LLGVSPNTMV DVTVRMADDH ENEQVRGKDV
RFVVNVLEIQ ERLLPEWDEL PALENFEGTL DELREKTRQE LIAAARKSAE DRVFLEYVRQ
VVAATTFDLP EALIEREADS ILREREGEYE RYGVRPEQVY EAQGTTREAL IERLKPAAEE
RAKRGLVLRE IARAEGLAPD ETEITQEIED IVASMEEEQR DSARIILGSE LRSFVAAGIV
DRKLRRRLLA IATGDPSFEQ QTTPAVADET HEAAGATPAA EIAETPTGAV DSIPEAAPAV
SEGNDTIAST EDGAAVEAAA HKPGME
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