Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1422 |
Symbol | |
ID | 5538895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1817226 |
End bp | 1818737 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640893559 |
Product | RNA-binding S1 domain-containing protein |
Protein accession | YP_001431535 |
Protein GI | 156741406 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.324209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATC AGGAGCGTCC CGTCGAAGAG CGGAATGAAC TGCTGGGCGA TTCGGCGCCG ACTGCGGCAG GCGTTGCGGT GGCGGACGCG GAAACTCAGC AGCAGTCGAT AGAGTCTCCC CCTGTTGGGG AAACGCCGGA TGGCGCCGGG GCGGCAGCGG ATGTGAGCGA CGTGGCGGTG TCGTCTGATG GCGGCGATAG CCGCGAATCC GTCCGCGCCG CCGATGAGTC GCCGGCTGCG GTGGCGGAAA GCGCCTCGGA AGCGCCGGTT CCTGCTGCTG AAACGCCGCC GACCGGGAGC GCCGAAGTCG CGCCGGAAGC GGCGGCGCCT GCCGGTACTG CCGAAGCCGC AAGTTATCAG GCGCCGGCTG AAGCGCCAAC CGGACGCCCG CGACGGGTGA AGGACCTGGC GCCCGGTATG GAACTGGAAG GACGGGTCAC CTCGATTGCG CTCTACGGCA TCTTCGTTGA TATTGGCGTC GGGCGCGACG GTCTGGTGCA TATTTCGGAG ATGAGCGACA CCCGTATCGA ATCGCCGAGT GATCTGGTCA AGATTGGCGA TACGGTGAAG GTGCGGGTAA AGAGCGTCGA ACCCGATGGT CGCCGGATCA GCCTGACGAT GCGCATGAAG GAGCGGGGCG CGGAACCGCG CAGTGGTCGC GGCAAAAAGA AGCCCGAGGT GGATTACGAT AAACTTGCTG CGCTGCGCGT CGGCGATAAT GTCGAGGGGA CGGTGACCGG GCTGGCGCCG TTTGGCGTGT TCGTCGATAT TGGCGTCGGC AAGGATGGGC TGGTGCATGT GTCGGAACTG GCGGAAGGGC GCGTCGAAAA GGCTGAGGAT GTCGTGCAGG TTGGTCAGAC CTATACCTTC AAGGTGCTGG AAGTCGATGC CGAGGGCGCT CGCATCAGCC TGAGTCTGCG CCGGGCGCAG CGTGGTCAAA AGTTGCAGCA ACTGGAGAAG GGGCAGATTC TCGAAGGCAC GATCAGCGGT CTGGCGCCGT TTGGCGCGTT CGTCGATATT GGCGTCGGGC GCGACGGGCT GGTGCATATT TCTGAGTTGT CGAACGCGCG TGTGGCGCGC GTCGAAGATG CGGTCAAGGT TGGCGATAAG GTGCAGGTGC GGGTGCTCGA TGTCGATCCG CAGAGCAAAC GGATCAGCCT GAGCCTGCGG CTGGAGGATA CGCCGCGCGA GCCGCCGCCG CGTGAGGAAC GACCGCGTGA GGAACGACCG CGGGAAGAGC GACCGCGCAT GGAGCGCGCA GTGCGCAGCG AAGGGCGCCC GCCGCGTGAA GAGCGCCCGC CGCGGCGTGA GCGTGTCAGC GATGCCTACT CCCCGGAGGA GGATGATTTT GGTGGGAATG CCACCCTCGA CGATTTGATG TCGAAGTTCG GCGGACCGCG CCGCAGTGAG CGTCGCCGCC GCCAGGACGA TGACGATGAT GTGGAAGACC GGAGTCTCCG CCGCCAGCGC GACGCTATTC GTCGCACGCT CCAACAACTC GACGACGATT GA
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Protein sequence | MTDQERPVEE RNELLGDSAP TAAGVAVADA ETQQQSIESP PVGETPDGAG AAADVSDVAV SSDGGDSRES VRAADESPAA VAESASEAPV PAAETPPTGS AEVAPEAAAP AGTAEAASYQ APAEAPTGRP RRVKDLAPGM ELEGRVTSIA LYGIFVDIGV GRDGLVHISE MSDTRIESPS DLVKIGDTVK VRVKSVEPDG RRISLTMRMK ERGAEPRSGR GKKKPEVDYD KLAALRVGDN VEGTVTGLAP FGVFVDIGVG KDGLVHVSEL AEGRVEKAED VVQVGQTYTF KVLEVDAEGA RISLSLRRAQ RGQKLQQLEK GQILEGTISG LAPFGAFVDI GVGRDGLVHI SELSNARVAR VEDAVKVGDK VQVRVLDVDP QSKRISLSLR LEDTPREPPP REERPREERP REERPRMERA VRSEGRPPRE ERPPRRERVS DAYSPEEDDF GGNATLDDLM SKFGGPRRSE RRRRQDDDDD VEDRSLRRQR DAIRRTLQQL DDD
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