| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1412 |
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| Symbol | |
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| ID | 5538885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1806259 |
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| End bp | 1807482 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640893549 |
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| Product | SCP-like extracellular |
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| Protein accession | YP_001431525 |
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| Protein GI | 156741396 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.787858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCAT TACCGGTTCG CATCGTCGTC ATCCTGGTTC TCGCCGCCTT TCTGAGCCTC
TCGCTCGACG CCGCAGCGCG CGTCCGTCCC ACGCCCGCCG CGCCGCTGGC GTTTCCGACT
TCGACGTTGG CGTTCCCGAC TCCGTCTGAT GATTCGGTCG CCGTTCCATT GGCGTTTCCG
ACTCCGCCAG CGACGCCGCC CGCCGCGCCG CTTGCGTTCC CAACTCCGCC GGTGACGCCG
CCCGCCGCGC CGTCGGCGTT TCCGACCTCG CCGGCGGACC CGGTCGCCGC GCCGCAGAGC
GCGCCGCTCA CCGTCTATCT GCCGCTCATC GCGCGCCCGG AGCCGTATCC CCCGGCGCGC
CGCGACATCG AACTTGAGTT TATTCGCCTG ATCAACCTGG AGCGCGCCGC CCTCGGTCGC
CGCGCCCTGC GCGAAGAGCC GCGCCTGACC CAAGCCGCGC GCCGCCTGGC CTACGACCTC
GCCGCGCGCG GCACAGGCGG TCACATCGGC TCGGACGGCT CAACGCCCGC CTCGCGCGCG
CGCGACGCCG GCTATCCCTG GTGGACGGGC GAAGTTGGGC TGGGCGCCGC CGTCGACGCC
GCCGATGCGG TGAAGATTTA CCGCAGCAGC CCGCCGCACT GGGACATCCT CATGAACCGT
GACAGCACCG TCATCGGCGT CGGCGTCGCG CCGGTGCTCG TCGGTCCGTT CGCCGGCTGC
TGCGTCGCCA TCCCGGCGAT GCTCGGCGTC GATCCGCCGC CGTCGGAAGG CGAGGTGGTC
GCGGCGCTCC TGGCGCGCAT CAACGCGCTG CGCGCCGAGC GCGATCACAA CGCGCCGCCG
TTGACCCTCA ACGCCGCGCT CAACGCCGTC GCCCGCCGCG TCGCCGACGA CCTGACCGCC
CGAAACGTCT GCGGGACCCT TCCATCGCAC GGTCCGCTCA CCCTCGACGA CTGGGCGCGC
GACGCCGGGT ATGGAGGCAG CGTCACCACG CGGCACAACG TCACCTGTCC CTATGACCCG
GTGCAGCTCC CCTGCGGACT CGATGCGTCC TTCGGCGGCG CGTCCGCCGA TGAGGTCGCG
CGGCGTATCA TGGAGTACGG CGCAGCGGGG GAGCCCTGCT CCGGGAACTT CAGTCATAAC
CGGCTCGCCG ACTCGACGCA AACTGACGTC GGCGTCGTCT TTTACCGCTG GGGCGCGGTC
GTCGTCACCG GTCGCCGTCC CTGA
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| Protein sequence | MPALPVRIVV ILVLAAFLSL SLDAAARVRP TPAAPLAFPT STLAFPTPSD DSVAVPLAFP
TPPATPPAAP LAFPTPPVTP PAAPSAFPTS PADPVAAPQS APLTVYLPLI ARPEPYPPAR
RDIELEFIRL INLERAALGR RALREEPRLT QAARRLAYDL AARGTGGHIG SDGSTPASRA
RDAGYPWWTG EVGLGAAVDA ADAVKIYRSS PPHWDILMNR DSTVIGVGVA PVLVGPFAGC
CVAIPAMLGV DPPPSEGEVV AALLARINAL RAERDHNAPP LTLNAALNAV ARRVADDLTA
RNVCGTLPSH GPLTLDDWAR DAGYGGSVTT RHNVTCPYDP VQLPCGLDAS FGGASADEVA
RRIMEYGAAG EPCSGNFSHN RLADSTQTDV GVVFYRWGAV VVTGRRP
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