Gene Rcas_1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1405 
Symbol 
ID5538878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1797641 
End bp1798891 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content64% 
IMG OID640893542 
Productchromosome partitioning ATPase 
Protein accessionYP_001431518 
Protein GI156741389 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.131537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTG AACTGTTATT GGTCACAAAC ACGCCGGGGT TGGTCGAGGC GCTTGGCGGC 
TATAACGGTC TTCTTCCCTT CCCTGCGCCG AACCTGGCGC GTGTGCGCAG TCTGGTCGCC
GGTGATCAAC CCCCGCCAGT GGTATACCTG GAAGACACAC GCGGCACGAT TGCCGATCTG
TGGGAAACCA TTCACGTTGC TCAGGCGCGC GGCGTGCGGG TGCTGATCGG GCTTCAGAGC
ATTGGCGTGG TGCATGCGGG CGACTTTACC GATGCGGGAT TAGCGATCAC CACAGCGCGC
GACGCTGACG CATTGGCTGC CTGGATCGCG CAGCAACTCG GCGTTGCCCG GCGTCTTGCC
GCGCGTCAGG TTACGATTGC GGTCGCCGGC GCCAAAGGCG GCATCGGGAA GAGTCTGGTG
GTTGCGTCGC TCGCAGAAGG GATGCGCCGC CGCGGTCTGC GGGTGCTCGT TGTTGACGGC
GACCTGTCGA ACTCCGGGCT GGTGCCGGAG TTCCGCATCC CGGCAGGATT CGGCTCGTTC
CTGACACTGC GCCAGGAAGG TCGCGGACAC TCGCAGTTTA CGCCGGCCAA TGTCGCGCGC
CTGATCTGGC GACACGCTCC CAGCGGCATC GACTTTCTCC TCGGTGCCGA TGAGGCTGCG
CTTGCTGCCG ATTTTACGCT GCCAGACTGG CGCGCGCTGA TGCAGGCAGT CGGCAGCCTG
AGTGAGGTGC TGGAGCGGGA TTACGATGTG GTACTGATCG ATACCGGTCC TGACATGAAG
AAGCGCCCAT ATGCGCTCGA AGCAGCACGC AATGGCGGGT GGGTCGTGCT GCCGGCGCCG
CCGGGACGCA AAGAGCGCGC GGGAGTCGGG ATCGCTCTGC AACAGTTTGC GGCGCATCAA
CCCGACCTGA CCGACCGCTG CCTGCTCATT TTGATGGAGC CTGAGCGTGG TGTGACCATT
GGTTTGCGCC AGGTTGCACC ATTGTTCAAC GAGCACTGGC CCAAAGCCCG CATTATCGGC
ACACTGCCGC GCGATCCGCA CCTGGTGAGC CTGGCGAACG AAGAGGCGGA TCGGTACGTC
TCGCCGCTGG ATGTCGGGAA GTTTCGCCCC TTTTCGCTCG CAGTTCACGC CATTGTTGAC
GAGATGTGCC GCGTAATCGG GCTGCCGCTG CCACAGCCAA AGCCGACCGT CAGCCTGTTC
CGGCGCTGGT TTCCGGGGAA GCCGGCGCTT CAGGTTGAAG GCGGTTTTTG A
 
Protein sequence
MATELLLVTN TPGLVEALGG YNGLLPFPAP NLARVRSLVA GDQPPPVVYL EDTRGTIADL 
WETIHVAQAR GVRVLIGLQS IGVVHAGDFT DAGLAITTAR DADALAAWIA QQLGVARRLA
ARQVTIAVAG AKGGIGKSLV VASLAEGMRR RGLRVLVVDG DLSNSGLVPE FRIPAGFGSF
LTLRQEGRGH SQFTPANVAR LIWRHAPSGI DFLLGADEAA LAADFTLPDW RALMQAVGSL
SEVLERDYDV VLIDTGPDMK KRPYALEAAR NGGWVVLPAP PGRKERAGVG IALQQFAAHQ
PDLTDRCLLI LMEPERGVTI GLRQVAPLFN EHWPKARIIG TLPRDPHLVS LANEEADRYV
SPLDVGKFRP FSLAVHAIVD EMCRVIGLPL PQPKPTVSLF RRWFPGKPAL QVEGGF