| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1386 |
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| Symbol | |
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| ID | 5538859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1773483 |
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| End bp | 1774448 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640893524 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_001431500 |
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| Protein GI | 156741371 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0371] Glycerol dehydrogenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.593428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCCCT CTTTCTACCC GATTCCCGCC ATTGTCGAGA TGCCGCTGCG CGAAATCACC
GAGCAGCGGC GCGTGGCGCA GGTGGCGAGC GGTCCGGCGC TCGCCGCAGC AGTGCGCGCA
GGCTTGCGTC TGCCCGCTGC GTGGAACGCC GAACCGCGCG AAGCAAGCGA GCCGCACTTC
GAGAACCTGG CGCGCACCGT TCCCGCCGAC GCTGAGGTGG TCTATGGCAT TGGCGGCGGT
CTCGCGGCGG ACGCTGCGAA ATACGTCGCC TGGCGGCACG GGTTGCCGCT GGCGCTGATC
CCAACCGCCC TCTCGGTCGA TGCGCACATG ACGTGGGTCA GCGGCGTCCG CCGCGATGGG
TGCGTGACGT ACCTCGCCAC CGGTCCGGCT ACGGTCGTCT ATGCCGATAT TCCGTTTCTG
GCGGCGGCGC CGCCGCACCT GCGCGCGGCC GGCGTCTGCG ACCTTCTCTC AATTGCAACG
GCGCTTCACG ACTGGCGCTA TGCCGAAGAA TGCGGTATGA ACCCGCCGGA ACAACGCTAC
ACGCCGTGGG TTGCCGCTGC TGCACGGGCG ATCCTCGATG GCACGCTCGA CATTGCGGAC
GCCGCAGGGC GCGGCGATCC GGCGGGCGTG CGCGAATTGC TGCGGTTGCT GGCGCTCGAA
GTGCAACTCT GCAATGTGAT CGGGCATAGC CGACCGGAAG AAGGGTCGGA ACACTACCTG
GCATATGCGC TGGAGGCACA TCCGTCGCTT GGTAGCGGCC ACGCCCACGG CGATCTGGTG
GGTCCGGCGA TCCTGCACAC GGCTGCCTGG CAGTGCCAGG ACATCGCGCC GCTGGAACGG
GCGCTGGCGC ACGCTGGCGT GCCGCTCGAC CGCGTGCCGG AAATGGTGAT GCAGGAGGTG
ATCTGCGAAC TTCCTGCGTA TGTCCGGCGC CATCGCCTGG CTTTCAGCAC CGCGCACAAC
CTGTAA
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| Protein sequence | MPPSFYPIPA IVEMPLREIT EQRRVAQVAS GPALAAAVRA GLRLPAAWNA EPREASEPHF
ENLARTVPAD AEVVYGIGGG LAADAAKYVA WRHGLPLALI PTALSVDAHM TWVSGVRRDG
CVTYLATGPA TVVYADIPFL AAAPPHLRAA GVCDLLSIAT ALHDWRYAEE CGMNPPEQRY
TPWVAAAARA ILDGTLDIAD AAGRGDPAGV RELLRLLALE VQLCNVIGHS RPEEGSEHYL
AYALEAHPSL GSGHAHGDLV GPAILHTAAW QCQDIAPLER ALAHAGVPLD RVPEMVMQEV
ICELPAYVRR HRLAFSTAHN L
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