| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1381 |
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| Symbol | |
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| ID | 5538854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1766672 |
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| End bp | 1769368 |
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| Gene Length | 2697 bp |
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| Protein Length | 898 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640893519 |
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| Product | SpoVR family protein |
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| Protein accession | YP_001431495 |
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| Protein GI | 156741366 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2719] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01443] intein C-terminal splicing region
[TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGTA CCCGTCTTCC CCCAGAGTTG CAGGCAGCAT GGGAGGAGAT TGAGACCTAT
GCAAAGGAGT ATGGGCTTGA TTTCTTCCCT ATTATTTATG AAGTTCTCGA TTATCGCACC
CTCTACGAGA CGGCAGCGCT GGGCGGATTT CCGATCCGCT ATCCCCACTG GCGCTTCGGT
ATGGAGTATG ACCAACTCAT GAAGGGCCAT ATCTGGCTTG GCTCGACGAT CTATGAGATG
GTCATCAATA CCAATCCGTC GTATGCGTAC CTGCTCGAAG GCAACGAGAT GGTGACGCAG
AAGATGGTGA TGGCGCATGT GGCGGCGCAC GTCGATTTCT TCAAGAATAA TATGTGGTTC
GCGCATACGA ACCGCAAAAT GCTCGATGAA ATGGCGAATC ACGCTGCTCG TGTGCAGCGA
ATGATCGACC GCTATGGCTA TGAGACGGTC GAGGAGTTCA TCGATATCTG TCTCTCGCTC
GAAAACCTGA TCGACTATCA CGCGCCGTAC ATCAAGCGCC CCGAAGCACA GACCCATCAT
TCGGTTCTGG CAGAGGAGGA TCTGCCGGTG GTCGAGGGGT TGCCGGTCGA ACGCAGCTAC
ATGCGCGACT ATATCAATCC GCCGGAGTTT ATTGAGCAGC AGCGAAAACG GCTCGAACGC
GAACGCGCTC GTCAGAAGAA GTTCCCGGAG AATCCGCAGA AGGATGTGCT CCTCTTTCTC
ATGAATTACG CACCGCTGGA ACGCTGGCAG CATTCGATCC TCGAAATTGT GCGCGATGAG
GCGTACTATT TCGCGCCTCA GGGAATGACG AAGATCCTCA ATGAAGGGTG GGCCTGCTGC
CGATACGATA CGCTGGTGTT CACCGATCAG GGCGTGCTCC GCATCGGCGA TATCGTCGCT
CAGCGACAGG CGGTGCGGGT GAGCGACGGC GAAACGCCGC AAGCCGTCTA TGATTGGGCG
GCGTTCGAGA ACTATGAGAC GATCCGGGTG CGCACGCGGC GCGGCTTGGA ACTCGAAGGC
TCGGTCAACC ATCGCGTCAT GCTGCCCGAC GGCGGCTGGC GCCGCCTCGA TGAACTCCAG
GTTGGCGAAA GGGTCAGGAT TGGCGGCGGT CAGAACTTGT GGGCGCAACA GTATGTCGCC
CTGGATTGGT CGCCGGTGCG CCATGCGACC CTCGCGCAGA TCGCTGATGC GGCAGAGGTC
GAGGTCGAGA CCGTCATCCG CTACCAGCGC AGCGTGCGTG GCGTTCACGC AACAACGCCG
GCGTCGCTCG TCGCAGCATA CGATGCCGCC ATCGCTGACC ACGGCCCGAT CATCCGGCGA
CGGGTCCCCA TTCGTGTGCC GGAGGTTGTA GATGAGCGCC TGGCGGCGTT CCTGGGGTAT
CTGTGCGGCG GTGGGCATAT CAGCGCGGTC AGGCACGCCA TCGAATTGAT GACCGCCGAT
GAGGATCAGG CGCGCGCCTT CGCCGATCTG GTCCGTTCAC TGTTCGGCAT CGAAGCGCGC
TGGCGCAGGG ATGGAAACCG CTGGCGCGTC TCTTTCTATT CGCGCGACGC TCAGGATTTC
CTGGTCCACC TTGGTCTCAA AACCGGCGTT GCAGCGCGCG AAAAGCGTGT GCCCGACGTC
ATTCTGCGCT CGCCGAAGCC GGTCGTTGCG GCGTTCCTGC GTGCGCTGTA CGACTGCGAT
GGCTGTGCAG GCGATGCTGG CGTTGTTCTC TCCACCGCCA GCGAGGAGAT GGGCAGAACC
GTTCAGGTGC TGCTGCTCAA CTTTGGCATT CTCGCCAGCC GCTGCGCCAA TACGGATGGT
ACATGGCACA TTCGCGCCAC CGGTCGTTCG GCTGCTGTCT TCTTCGCCGA GATCGGCTTC
GGTCTGGCGC GCAAGCAGGC GGCGCTGGCG CACTCTATCG AGGATCGGCG CCGGTTTCAG
CGTGAGGAGT GGTCGGACGA GATTGTGGCA ATTGAGCGGG GACGCGCTCA TGTGTACGAT
ATCTCGGTGC ATGCAACGCA CCGCTACGCC GCGCAGGGGT TCATCAACCA CAATAGCTAC
TGGCACTCGG AGATTATGAC GAAAAAGGCG TTGCGCGATG ATGAGTTGAT CGACTTTGCC
GACCATCACT CCGGGGTGGT GGCGGTCCAT CCCGGTCGCC TCAATCCGTA TAAACTCGGA
CTCGAACTGT TGCGCAATAT CGAGTTTCGC TGGAATACCG GGCGCTTTGG TAAGGAGTAC
GAGGAGTGTG AAGACCTGGC TGCCAAACTC AGTTGGGATA AGCAACTGGG GCTAGGGCGT
CAGAAGTTGT TCGAGATACG CCGTCTCTAC AACGATGTCA CCTTCATCGA CGAGTTCCTG
ACGCCGGAGT TTGTGATGGA GCAGAAGCTC TTTACATTCC GGTATAATCG TGATACAGAC
ATGTATGAGA TTGCGTCGCG CGAGTTCAAG GAGATTAAGG AGAAACTCCT GTTCCGCCTG
ACCAATTTCG GTCAACCGTT CATTTATGTC GAAGATGGCA ATTACAACAA TCGCGGCGAA
CTCTATCTGC GCCATCGTTA TGAGGGGGTC GAACTGAAGA TGGACTATGC GCGCGATACG
TTGCGCAATA TTCAGCGCAT CTGGACGCGC CCGGTGCATC TCGAAACAGT CGTGGACGAA
AAGCGGCGAT TGATCTCATT CGACGGACGT GATTTCTCGG AACGGAAGAT GGATTAG
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| Protein sequence | MKSTRLPPEL QAAWEEIETY AKEYGLDFFP IIYEVLDYRT LYETAALGGF PIRYPHWRFG
MEYDQLMKGH IWLGSTIYEM VINTNPSYAY LLEGNEMVTQ KMVMAHVAAH VDFFKNNMWF
AHTNRKMLDE MANHAARVQR MIDRYGYETV EEFIDICLSL ENLIDYHAPY IKRPEAQTHH
SVLAEEDLPV VEGLPVERSY MRDYINPPEF IEQQRKRLER ERARQKKFPE NPQKDVLLFL
MNYAPLERWQ HSILEIVRDE AYYFAPQGMT KILNEGWACC RYDTLVFTDQ GVLRIGDIVA
QRQAVRVSDG ETPQAVYDWA AFENYETIRV RTRRGLELEG SVNHRVMLPD GGWRRLDELQ
VGERVRIGGG QNLWAQQYVA LDWSPVRHAT LAQIADAAEV EVETVIRYQR SVRGVHATTP
ASLVAAYDAA IADHGPIIRR RVPIRVPEVV DERLAAFLGY LCGGGHISAV RHAIELMTAD
EDQARAFADL VRSLFGIEAR WRRDGNRWRV SFYSRDAQDF LVHLGLKTGV AAREKRVPDV
ILRSPKPVVA AFLRALYDCD GCAGDAGVVL STASEEMGRT VQVLLLNFGI LASRCANTDG
TWHIRATGRS AAVFFAEIGF GLARKQAALA HSIEDRRRFQ REEWSDEIVA IERGRAHVYD
ISVHATHRYA AQGFINHNSY WHSEIMTKKA LRDDELIDFA DHHSGVVAVH PGRLNPYKLG
LELLRNIEFR WNTGRFGKEY EECEDLAAKL SWDKQLGLGR QKLFEIRRLY NDVTFIDEFL
TPEFVMEQKL FTFRYNRDTD MYEIASREFK EIKEKLLFRL TNFGQPFIYV EDGNYNNRGE
LYLRHRYEGV ELKMDYARDT LRNIQRIWTR PVHLETVVDE KRRLISFDGR DFSERKMD
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