| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1338 |
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| Symbol | |
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| ID | 5538810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1715938 |
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| End bp | 1717185 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893475 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001431452 |
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| Protein GI | 156741323 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCA CCCACGATCC GCAATCGTAC TGGCAAGCAA CGGCGCCTGC GACGATCCTT
CCTGTCGATC TTCCTCCAAC CGCGAATGTC GTGGTTGTCG GCGGCGGTTT TTTCGGCGCA
GCGACGACCC TGTTTCTGGC GCGTGCCGGC GCTGCGCCGA TCCTGGTCGA GCAGGCGGCG
CCCGCCTGCG GCGCCACCGG GCGCAACGGT GGCTTTCACG TCGTCGGAAC GGCGGAAGGA
TATGCCGATG CCGTTGCGCG TCTGGGACGC GAAACCGCCC GCGCGATCAT GCAGATCACG
CTCGACAGTC GCGCATTGTT GCGACAGGCG CTTGTCGAAG AACAGATTGC ATGCGACTAC
CGTGAGCCGG GACATCTGAC TCTGGCATTG GGTGAAGCGC AGTACGCCGA TCTCCAGCGC
CATGTCGCCG CGCTGCGCGC CGATGGATTC GCCGCTGAAC TCTTCGACCG CCAGCAGACG
CAGGCGTTGA TCCGCACGCC GCTCAGTGAA GAGATCACAG GAGCGTTGTA TGGTCCCGAA
AATGCACTGC TCCATTCGGC GCGGTTGGTG TATGGGTTGA TAGCAGCCGC ACAACGGCAC
GGCGCGCGTC TGGCAATGGC TCGGGTCGAA CGGTTGGTCC CGCACAATGG TCACGTGCGC
GTCATCACCA ATTGCGGCGT GGTGGAAGCG GGTGCGGTAG TGGTGACCGT CAATGCCTGG
ACGCGCGACC TGATCCCGAC ATTGCGCGAC GTCATCACGC CGGTGCGCGG TCAGGCGCTG
GCGTATGCCC CCATCCCGCG CGTCTTCGAA CAGGGTATCG GCGCATCAGT GACCCCTACC
GGCGAATACT GGCATCAAAC GCCAGATGGA TCGATTGTGA TCGGCGGGTG CCGCGCTCTC
GCGCCAGGGC GCGATGTTGG CGTCACCGAA ACGGTTCCGA CTCCTGAAGT GATAGCCGCC
ATTGAGGAGG TTCTGCCACG CCTGTTCCCG CATCTCAGTG GTCTGGAAGT CACCCGGCGC
TGGGCAGGGT TGATGGCGTT CACCACCGAC TACGTACCGG TCGCTGATGC TGCTCCGGCG
ATGCCAGGGG TGTGGGTAGC CGGCGGATTC TGCGGTCACG GCATGCCATT CGGGATGCGC
TTCGGTCAGT TGCTGGCAGA AGCGGCGCTT AGCGGCGTCC TGCCCGCTGC GCTGACTCCG
TTCCGCGTAA CGCGCCCGAC ACTGCAACCA CGTCATCACC AGCAATGA
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| Protein sequence | MNSTHDPQSY WQATAPATIL PVDLPPTANV VVVGGGFFGA ATTLFLARAG AAPILVEQAA
PACGATGRNG GFHVVGTAEG YADAVARLGR ETARAIMQIT LDSRALLRQA LVEEQIACDY
REPGHLTLAL GEAQYADLQR HVAALRADGF AAELFDRQQT QALIRTPLSE EITGALYGPE
NALLHSARLV YGLIAAAQRH GARLAMARVE RLVPHNGHVR VITNCGVVEA GAVVVTVNAW
TRDLIPTLRD VITPVRGQAL AYAPIPRVFE QGIGASVTPT GEYWHQTPDG SIVIGGCRAL
APGRDVGVTE TVPTPEVIAA IEEVLPRLFP HLSGLEVTRR WAGLMAFTTD YVPVADAAPA
MPGVWVAGGF CGHGMPFGMR FGQLLAEAAL SGVLPAALTP FRVTRPTLQP RHHQQ
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