Gene Rcas_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1333 
Symbol 
ID5538805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1711121 
End bp1711618 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content59% 
IMG OID640893470 
Productcarbonic anhydrase 
Protein accessionYP_001431447 
Protein GI156741318 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.454871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTT TCGATGAATT CCTGAAAGCA AATGAAGCCT TTGCCGCCAA TTTCACCCAT 
GGTGATCTCG CCATGCCCCC CGCGCGCAGG GTCGCTGTCG TCGCCTGTAT GGACGCCCGC
CTGCATCCTG AGAAAGTGCT GGGGATCGAT ATCGGCGACG CGCATGTGAT CCGCAATGCC
GGTGGTCGCG CCCACGACGC GATCCGTTCA CTTGTGATCT CGCAGCAATT GCTGGGAACG
CGAGAGATTG TGGTGTTGCA CCACACCGAC TGCGGGATGC TGACGTTCAC CAATGAGCAA
CTGGCGGCGA AGATCGCTGC CGATCTCAAT GTGCATGTGG AGGGGCAGGA TTTTCTGCCA
TTCGCCGATC TCGAGCAGAG TGTGCGCGAT GATGTGGCAT TGCTGCGCAA CTCGCCGTTG
ATCCCGAAGG ATATCCCGAT CAGTGGTGCG ATCTACGACG TTCGCACCGG CAGGGTGCAC
GAGGTGGTGC GAGCGTAG
 
Protein sequence
MTRFDEFLKA NEAFAANFTH GDLAMPPARR VAVVACMDAR LHPEKVLGID IGDAHVIRNA 
GGRAHDAIRS LVISQQLLGT REIVVLHHTD CGMLTFTNEQ LAAKIAADLN VHVEGQDFLP
FADLEQSVRD DVALLRNSPL IPKDIPISGA IYDVRTGRVH EVVRA