Gene Rcas_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1298 
Symbol 
ID5538770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1670836 
End bp1671645 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content60% 
IMG OID640893436 
Productmethyltransferase type 11 
Protein accessionYP_001431413 
Protein GI156741284 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACG AGACATCCGA TATCTATTGC GCCTACGCGC CGTTCTATGA TGGAAGCGGT 
CAGATTCGCT TTGCAATACT CTTCGCTCAC TACCTGTTGG GCGACATCCT GCCGCGTCAC
CCGGTTGCAG GGCGGCGGGC GCTCGATCTC GCATGCGGGA CGGGAACGCT GGCGCTGATC
CTTGCCGATG CGGGCTGGCT CGTCGTCGGC GTGGACCGCT CCCCGGCAAT GATCGCCATT
GCGGGCAACC GCGCGCAATC GGTGGATACG GCGGTTCGTC CGCACTTTAT CGAAGCGGAT
ATGCGCTGGT TGTGGCGGGA GATGCCACAT ACCACCGACG AGGCAACCGA GACTCTGCGA
CGAGGTTCCT TCGATCTGGT CACCTGCACG TATGATAGTC TCAATTACAT GCTGACTGAA
GAAGACCTGG CGGCGTGCTT TTCGACGGCG GCAGAAGCGC TGGCGCCGGA AGGCTTGTTC
GTGGCGGATA TGAACACGCG CCACTTCCTT GAGCACGATT GGGGCGAAGT GGAGATTATT
GAACGACCGG GATTTATTCA GGTCAATCGG AGCCGGTTCG ATCCGGCGAC GAATTGCTCA
ACGATGCGCC TGATCGGGTT TGTCGGCGAT GACCACAGCG GGTACGAACG ATTCGAGGAG
ATACACATCG AGCGCGCCTA TCCGCCGGAA ACCGTCGCAA TGTTGATCGG CGCCGCCGGG
TTGAGTGTCG AAGCGGTGTA TGATTGTTTC ACCACACAAC CGATTGGTGA GCGCACGCAA
CGCATCGCCT GGATTGCACG GAAACGGTAG
 
Protein sequence
MPDETSDIYC AYAPFYDGSG QIRFAILFAH YLLGDILPRH PVAGRRALDL ACGTGTLALI 
LADAGWLVVG VDRSPAMIAI AGNRAQSVDT AVRPHFIEAD MRWLWREMPH TTDEATETLR
RGSFDLVTCT YDSLNYMLTE EDLAACFSTA AEALAPEGLF VADMNTRHFL EHDWGEVEII
ERPGFIQVNR SRFDPATNCS TMRLIGFVGD DHSGYERFEE IHIERAYPPE TVAMLIGAAG
LSVEAVYDCF TTQPIGERTQ RIAWIARKR