Gene Rcas_1268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1268 
Symbol 
ID5538740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1639184 
End bp1639660 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content62% 
IMG OID640893406 
ProductH+transporting two-sector ATPase delta (OSCP) subunit 
Protein accessionYP_001431383 
Protein GI156741254 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGCAT CTGAGGCTCA GGTCATTGCA CGGGCATTGT TCGACTCGCT GACCGGCGCA 
GCACTACAGG CGCTCCACAC CGCAACCAGC ATCAATGGCG AGGTGACAAC GGAGCGTCTG
TTGGCGGCGC TGCCAGCAGA TGCTCCGCGT GAGGTGCGCA ACCTGATCCT GGCGCTTGGC
AAAGAGGGCA ACCTCGATCG CCTGCCGGCC GTCGTGGCTG CTTTTGAGCA GATGACACGC
CGCGGCGGCG CACGGCCGCT GACCGGCGAG GTGACCAGCG CCGTCGAGTT GAGCCCGCAA
CAGCGTGAAC GTATCACTGA ACAACTGAAA GCGCGCTATG GTCCCGATCT GGAAGTGCGC
TTCAGCGTCG ATGAGTCGCT GATCGGCGGG TTGATCATTC GCATTGGCGA TCAGGTTCTC
GATACCAGTC TGCGCACGCG CATGGCCGCC ATTCAGCGCA ATATGATGAC AGGGTAG
 
Protein sequence
MSASEAQVIA RALFDSLTGA ALQALHTATS INGEVTTERL LAALPADAPR EVRNLILALG 
KEGNLDRLPA VVAAFEQMTR RGGARPLTGE VTSAVELSPQ QRERITEQLK ARYGPDLEVR
FSVDESLIGG LIIRIGDQVL DTSLRTRMAA IQRNMMTG