| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1260 |
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| Symbol | |
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| ID | 5538732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1631066 |
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| End bp | 1632184 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893398 |
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| Product | oxidoreductase domain-containing protein |
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| Protein accession | YP_001431375 |
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| Protein GI | 156741246 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.140047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCAG AGATTGGCAT TGGATTGGTT GGCTATGGCG GCATCGGGCG CATGCATGCG
CTCTGTTATC AAATGCTGCC GCTGGCATAC CCCAACCTGG CGGAGCGAGC GCGTATCGTA
GCAGTTGCCA CTGCCAGCGT CGCGTCGGCA GAGCGGGCGC GCCGTGAACT CGGCAAGCAT
GTGTTGACGA CCACCGATCT CGGCGCGTTG CTGGCGCATC CCGCTGTGAC GGTCGTGGAC
TGCTGTGCGC CAACCGGCGA TCATGCCCGG ATCGCAAAGG CGGCGCTTGC GGCTGGAAAG
GCACTCTTCT GCGAAAAACC GCTTGGCGCA ACGCCAGACG AATCGGCGCG CATTGTCGAA
CTGGCGCGCG TGAATGGATT GACCGGCAGC GTGAACTTTC ATCTACGATT CGCTCCGGCG
ATCCAGGAGG CGCGCCGACG TGTGACCGGC GGATTGCTCG GCGAGGTGCG CGGGTTTCAC
CTGCGCTACT ACCGCAGCAG CAACCTGCGG CGCGATCGCG CCATCACCTG GCGTTTCAGC
GGACCGGGGA GCGGCGTGCT TGCCGACCTC GGATCGCACA TGATCGATCT GACCATGCAT
CTGCTCGGTC CAATCCGCGC AGTGTCGGCG CGCACCGCCA CACTCATCAC CGAGCGCCCT
GGCGCCAACG GCGTTCCCTC ACCGGTCGAA GGAGACGACG TCGCCTGGTT GTCGCTCGAA
CTGATCAATG GCGGCTATGG AACCATCGAA GTCTCGAAAA TGGTCCCCGG CGCCAGCGAC
GACATTCGTA TCGAAGCATA TGGCAGCGCC GGCGCCCTGA TCTTCGACAC CCGCGATCCG
AACGGGCTGG AGGTCATCGA AGGGATCGGC GAGATCGGCG GACGACGCAT TGCCACGCTC
AGCCGAACGA TGCCTCCGGC AACACTGCCA TCGCCGGAAA CGCCGGGAGG GACGTTGCAG
TGGCATCTGG CATCAATCGC ATCGTTCATT GACGCACTGT ATCGTGGCGT CTCCCCGGAA
CCGACATTGA CCAATGGGTG GCTGGCGGAT TGCGTGATCG GCGCAGCGCG GCAAAGCGCC
GCAAGCGGTG GCGCGTGGAT CGGTGTAGAC GAAGACTGA
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| Protein sequence | MAAEIGIGLV GYGGIGRMHA LCYQMLPLAY PNLAERARIV AVATASVASA ERARRELGKH
VLTTTDLGAL LAHPAVTVVD CCAPTGDHAR IAKAALAAGK ALFCEKPLGA TPDESARIVE
LARVNGLTGS VNFHLRFAPA IQEARRRVTG GLLGEVRGFH LRYYRSSNLR RDRAITWRFS
GPGSGVLADL GSHMIDLTMH LLGPIRAVSA RTATLITERP GANGVPSPVE GDDVAWLSLE
LINGGYGTIE VSKMVPGASD DIRIEAYGSA GALIFDTRDP NGLEVIEGIG EIGGRRIATL
SRTMPPATLP SPETPGGTLQ WHLASIASFI DALYRGVSPE PTLTNGWLAD CVIGAARQSA
ASGGAWIGVD ED
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