Gene Rcas_1257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1257 
Symbol 
ID5538729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1625528 
End bp1625842 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content61% 
IMG OID640893395 
Producthypothetical protein 
Protein accessionYP_001431372 
Protein GI156741243 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATG TTCTTCCTGC AATCGAGCAA TGGCGTGCGC GCGGCGAGCG TGTGGCGTTT 
GCCACTGTGG TGAAGACGCT TGGTTCTGCG CCACGCGGTG TCGGCGCAAA GATGGCAGTA
TCATCGAGCG GCGCTATGAT CGGCTCGGTC AGCGGCGGAT GTATCGAGGG CGCGGTCTTC
GATGCATGCC AGGAAGCGAT CAAGACCGGT AAAGCGCAGT TGTTGCACTT CGGCGTCGCC
GACGACGATG CCTGGGATGT GGGGCTGGCA TGCGGCGGCA TCATTGATGT GTTCGTCGAG
CCGCTGGACT GGTAG
 
Protein sequence
MKDVLPAIEQ WRARGERVAF ATVVKTLGSA PRGVGAKMAV SSSGAMIGSV SGGCIEGAVF 
DACQEAIKTG KAQLLHFGVA DDDAWDVGLA CGGIIDVFVE PLDW