| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1250 |
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| Symbol | |
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| ID | 5538722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1615551 |
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| End bp | 1617383 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893388 |
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| Product | ABC transporter related |
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| Protein accession | YP_001431365 |
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| Protein GI | 156741236 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGCA CACCATTCGA TGATGACGAG ATTTTAGGGA AAGCCTACGA TGCGGCGCTG
GTGCGCCGCC TGGGGGTGTT CATCGCGCCC TACTGGCGGC GAGTCGCGCT GGCGACAGCA
CTGATGTTCG GCGGGGCAGC CGTAGAACTT GCACCGCCAT TCCTCGTCAA GCAGGCAATC
GACGGTCCGA TTGCGGCGCG CGATCCGGCG GGCATTCTGC CGCTCTTCGG GTTGTACGCC
GCTGCGCTGC TGGCTGCTTT CGGGTTTCGT TATGGTCAGA CGTATATCGT ACAGTTGGTC
GGGCAGCAGG TGATGGTCGA TATCCGCACC CGCATCTTCA GCCATATCCA GCGCATGAGC
CTGGCATTCT TCGACCGCAA CCCCGTCGGG CGGCTGATCA CCCGCCTGAC GAACGATGTC
GATGCGCTTA ATGAGTTCAT CACCCAGGGA ACGGTGGCGC TGCTGGGCGA TCTGGTGCGC
CTGTTGTTCA TCGTCATTAC GATGCTGCTG CTGAACTGGC GGCTGGCATT GATCAGTTTC
ATCATGTTTC CCGCAGTCAT GCTGGCATCG AGTATATTTC AGCGCATCAT GCGCGGCGTC
TACCGGCGCG TCCGGCAGCG CATTGCGCGC ATCAACGCCT TTTTGAACGA GCAGATCAGC
GGCATCCTGG TGACGCAGTT ATTCAACCGC GAAGAGCAGA GCCGCATCCG ATTCGCCGAA
CTGAGCCGCG ATTATCTGGC GGCGCAACTC GAGTCGAACC GGACGTTTGC AATCTTCTTT
CCGCTTATCA ACTTCCTTTC GGTGACGGCG ATGGCGCTGC TCCTCTACTT TGGCGGTCAG
GCAGTGCTGG CGGGCATAGC GACCCTTGGC ATGCTGGTGG CGTTCATTCA ATACACCGAT
CAGGCATTTC AGCCGATCCG CCAGATCGCC GAACGTTACA ACACCTTCCA GTCGGCGATG
GCGTCGGCGG AGCGCATCTT CCGTGTGCTC GACACGCCTG CCACGGTGGT CGATCCAGCG
CATCCACGAT CATTGCCGTC GCCGGTGCGA GGTGAGATTA CGTTCAAGAA CGTATGGTTC
ACCTACGATA CCGAGGCCGC CGGTCCCGAC GGCGCCGGTC TGACGGACTC AGATGACCGG
TGGGTGCTGC GCGGTGTGTC GTTCACCATT CCGGCCGGGC AGGCAGTAGC CGTTGTGGGA
GCGACCGGCG CCGGCAAAAC GTCGCTGGTG AGCCTGATGG CGCGTTTCTA CGATATTCAG
CGTGGATCGA TCACCCTCGA TGGCATCGAT ATTCGTGAAT TGCGTCAGGC GGAGTTGCGC
CGCCACGTGA GCGCCGTACC GCAGGACCCG GTGTGTTTTA GCGGATCCAT TGCCTCGAAT
ATTCGCCTGC ACGACGATAG TATCAGCGAT GAGCAGGTCC GGCGCGCTGC CGAGATTGCG
CGCGCGGCGC CCTTCATCGA GCGGTTGCCC GGCGGCTATG AGTACGAAGT GCGCGAACGC
GGCAGCAATC TGTCGGTCGG TCAACGACAA TTACTGGCAT TTGCCCGCGC AATTGCGTTC
AACCCCGAGG TGCTCCTCAT CCTCGATGAA GCGACATCGA GCGTAGACAC CGAAACCGAG
GCGTTGATGC AGGAAGCGCT CGAACGCCTG ATCCACGGAC GCACCAGCAT TGTGATTGCG
CACCGGCTTT CGACCATTCG CCACGTTGAT CGGATACTTG TGCTTTACAA GGGACGCCTC
GTGGAGGACG GCTCGCACGA CGAACTGCTG GCGAAACGCG GCTATTATTA CCGCCTGTAT
CAACTTCAAT TCGCGGAAGA GGTCAGGGGT TAG
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| Protein sequence | MARTPFDDDE ILGKAYDAAL VRRLGVFIAP YWRRVALATA LMFGGAAVEL APPFLVKQAI
DGPIAARDPA GILPLFGLYA AALLAAFGFR YGQTYIVQLV GQQVMVDIRT RIFSHIQRMS
LAFFDRNPVG RLITRLTNDV DALNEFITQG TVALLGDLVR LLFIVITMLL LNWRLALISF
IMFPAVMLAS SIFQRIMRGV YRRVRQRIAR INAFLNEQIS GILVTQLFNR EEQSRIRFAE
LSRDYLAAQL ESNRTFAIFF PLINFLSVTA MALLLYFGGQ AVLAGIATLG MLVAFIQYTD
QAFQPIRQIA ERYNTFQSAM ASAERIFRVL DTPATVVDPA HPRSLPSPVR GEITFKNVWF
TYDTEAAGPD GAGLTDSDDR WVLRGVSFTI PAGQAVAVVG ATGAGKTSLV SLMARFYDIQ
RGSITLDGID IRELRQAELR RHVSAVPQDP VCFSGSIASN IRLHDDSISD EQVRRAAEIA
RAAPFIERLP GGYEYEVRER GSNLSVGQRQ LLAFARAIAF NPEVLLILDE ATSSVDTETE
ALMQEALERL IHGRTSIVIA HRLSTIRHVD RILVLYKGRL VEDGSHDELL AKRGYYYRLY
QLQFAEEVRG
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