| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1246 |
|---|
| Symbol | |
|---|
| ID | 5538718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 1610369 |
|---|
| End bp | 1610761 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640893384 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001431361 |
|---|
| Protein GI | 156741232 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCACG CCCCCATTTC CGACGAAGAA GAACGCATCG CCAAGGCGAT TGTGGACGCT
GCGTATGCCG TTCATCGTGC GCTTGGACCC GGCTTGCTGG AAAACGTCTA CGAAGTCTGT
TTTTGCCATG AACTGGCCAA ACGGAGTTTA TCCTATCGCC GGCAAGTGGT GGTGCCGATT
GTCTACGACG GCATCACGTT TGATGAAGGC TTGCGACTCG ATGTGCTGGT GGAGGAAGGA
GTCATCTGCG AATTGAAAGC GGTGGAGGTC ATGCATCCTG TGTTCACGGC TCAACTCTTG
ACCCAGCTCA AGTTGACCGG CAAGCGCCTT GGCTTCCTGA TCAATTTTAA TGTGCCGGTG
ATCAAGCAGG GCATCAAGCG ATTAGTTCTA TGA
|
|---|
| Protein sequence | MNHAPISDEE ERIAKAIVDA AYAVHRALGP GLLENVYEVC FCHELAKRSL SYRRQVVVPI
VYDGITFDEG LRLDVLVEEG VICELKAVEV MHPVFTAQLL TQLKLTGKRL GFLINFNVPV
IKQGIKRLVL
|
|---|
| |