| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1235 |
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| Symbol | |
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| ID | 5538704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1596285 |
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| End bp | 1597181 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640893370 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001431350 |
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| Protein GI | 156741221 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4132] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCAC TAACCCGCAC AGAAACGAGT CGGTCAGTCA TCGAACGCCG CGCCTTCTCG
TGGACGTGGC TGGGTGTGGC GCCCTTCTTT CTATTCGTGG CAGCGTTTCT GATCTGGCCC
ACACTGTCGA TCATTGCACA GAGTTTTCTC GATCAGGAGC GTCGCCTGTC GTTGCAAAAC
ATTCTGGAAT TGGGGCGACC GTTCATTGTG TCGTCGTATG TGTACAGCCT GCAACTCAGC
GCCGTGACCG CTATTGGCGG AGGGGCGCTC GGCGGGCTGT TGGCGTATGC GATCACCATA
GGGGGATTGC CGCGCCCGTT GCGCGATGCA GTGCTCAGTT TCTCCGGCGT TGCGTCGAAC
TTCGCCGGCG TGCCGCTGGC GTTCGCATTC ATTGCAACGC TTGGGCAACT GGGAGTGGTC
ACGCAATGGC TGCGTTCGGT CGGGATCAAC CTGTACCCTG CCTTCAGCCT CTATAGTTTC
TGGGGGTTGA GCATTGTCTA TATCTACTTT CAGATTCCGC TCATGGTGCT GATCATGGGT
CCGGCGTTCG AGGGAATGCG ACGCGAATGG CGCGAAGCCG CCGAGAGCCT TGGCGCAACC
TCGTGGCACT ACTGGCGCTA TGTCGGGTTG CCTATTCTGC TCCCTTCTAT CCTTGGCACA
ATGGTGTTGC TGTTCGGCAA TGCGTTCGGT GCGCACGCGA CTGCCTTTCA GTTGACCGGC
GGCGGCAGTC AGGGCAATGT GGTTACTATT CTGATCGGCG CGCAGATCAG CAGCGATGCG
CTTGCCAACC CCGGTCTCGG CAATGCCCTT GCGCTGGGAA TGATCGTCAT CATGGGCGTT
TGTATTGGTC TGTACACCTG GCTCCAGCGT CTCTCGGCGC GCTGGCTCCG CTCATAA
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| Protein sequence | MAPLTRTETS RSVIERRAFS WTWLGVAPFF LFVAAFLIWP TLSIIAQSFL DQERRLSLQN
ILELGRPFIV SSYVYSLQLS AVTAIGGGAL GGLLAYAITI GGLPRPLRDA VLSFSGVASN
FAGVPLAFAF IATLGQLGVV TQWLRSVGIN LYPAFSLYSF WGLSIVYIYF QIPLMVLIMG
PAFEGMRREW REAAESLGAT SWHYWRYVGL PILLPSILGT MVLLFGNAFG AHATAFQLTG
GGSQGNVVTI LIGAQISSDA LANPGLGNAL ALGMIVIMGV CIGLYTWLQR LSARWLRS
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