Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1144 |
Symbol | |
ID | 5538610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1480963 |
End bp | 1481553 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640893276 |
Product | hypothetical protein |
Protein accession | YP_001431259 |
Protein GI | 156741130 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.574729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCAAC GTCCACCCCT GAAGCGTGTT GCCCGCGCGC TCATCTCTCT CGGTCGCGGT ATTGCGGCTG TGCTGACCGG TGGAATTCTG CTGCTGGGGT TGACGGCAGC AATGGTTGTT GTGCAGGGCA GCCGGGACGA AGCGCGACCG GCTGGCGCGG CACTCGTGAC CGGTGAAGCG GTTGACAGCG CCCTCACACC CGAACAAAAA GCGCAGTGCG ATCATGCCAT CAATCTCTAC CGCCGCGGGA TGGTTAGCCG CATGATTCTA ACCGGCGATT CCATGTTTGT GGCGCTGGCT CGACCGTACC TGATCGATCA GGGATTGCCG CAACAGGCGT TGCTGCTCGC AGAAAACACA TCACTGGTCG GAGGTATCCG CGCCGCAGCG AACCTGGCGC GCATCCAGGG CATTTCGTCG GTCGTTATCG TGGCAGAGCC GCCAATGATG CTCACCGCAC TCAAGGTTGC ACGCGACGAG GGGCTGACAG GGTACGGATC ATCTCCCGGC GTTGTTTCAG TCGTTGAGAA ACCCTATGCT GTGGCAGACG GGACCTGGCG CTATCTAAAG TACGTATTTG CGGGGATATG A
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Protein sequence | MNQRPPLKRV ARALISLGRG IAAVLTGGIL LLGLTAAMVV VQGSRDEARP AGAALVTGEA VDSALTPEQK AQCDHAINLY RRGMVSRMIL TGDSMFVALA RPYLIDQGLP QQALLLAENT SLVGGIRAAA NLARIQGISS VVIVAEPPMM LTALKVARDE GLTGYGSSPG VVSVVEKPYA VADGTWRYLK YVFAGI
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