Gene Rcas_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1144 
Symbol 
ID5538610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1480963 
End bp1481553 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content60% 
IMG OID640893276 
Producthypothetical protein 
Protein accessionYP_001431259 
Protein GI156741130 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.574729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCAAC GTCCACCCCT GAAGCGTGTT GCCCGCGCGC TCATCTCTCT CGGTCGCGGT 
ATTGCGGCTG TGCTGACCGG TGGAATTCTG CTGCTGGGGT TGACGGCAGC AATGGTTGTT
GTGCAGGGCA GCCGGGACGA AGCGCGACCG GCTGGCGCGG CACTCGTGAC CGGTGAAGCG
GTTGACAGCG CCCTCACACC CGAACAAAAA GCGCAGTGCG ATCATGCCAT CAATCTCTAC
CGCCGCGGGA TGGTTAGCCG CATGATTCTA ACCGGCGATT CCATGTTTGT GGCGCTGGCT
CGACCGTACC TGATCGATCA GGGATTGCCG CAACAGGCGT TGCTGCTCGC AGAAAACACA
TCACTGGTCG GAGGTATCCG CGCCGCAGCG AACCTGGCGC GCATCCAGGG CATTTCGTCG
GTCGTTATCG TGGCAGAGCC GCCAATGATG CTCACCGCAC TCAAGGTTGC ACGCGACGAG
GGGCTGACAG GGTACGGATC ATCTCCCGGC GTTGTTTCAG TCGTTGAGAA ACCCTATGCT
GTGGCAGACG GGACCTGGCG CTATCTAAAG TACGTATTTG CGGGGATATG A
 
Protein sequence
MNQRPPLKRV ARALISLGRG IAAVLTGGIL LLGLTAAMVV VQGSRDEARP AGAALVTGEA 
VDSALTPEQK AQCDHAINLY RRGMVSRMIL TGDSMFVALA RPYLIDQGLP QQALLLAENT
SLVGGIRAAA NLARIQGISS VVIVAEPPMM LTALKVARDE GLTGYGSSPG VVSVVEKPYA
VADGTWRYLK YVFAGI