| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1134 |
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| Symbol | |
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| ID | 5538600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1468453 |
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| End bp | 1469781 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640893268 |
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| Product | NusA antitermination factor |
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| Protein accession | YP_001431251 |
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| Protein GI | 156741122 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000746814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.939177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCG ATTTTTATGC AGCAATCTCA CAGATTGCGT CCGAACGCGG CATTCCCAAG
GAAGCCATCG TCGAGGTCAT GGAAAAGGCG CTGGCGACAG CGTATCGCCG AACGCTCGGT
CCTAACCCAC CGCCAATGGA GATATCGGTC CGGCTGGACC CGCTGACGGG CGCGGCGCGC
GTCTATTCCG AAAAACAGGT CGTTGACGAT GTCTACGATG AGCGCTTTGA GATCGATCTG
GAGAGCGCCC GCAAGATCAA GCCCGATGTC GAACTGGGCG AGTCGGTCGT CGTCGAGACG
ACGCCGAAGG ATTTTGGACG AATCGCAGCG CAAACGGCGA AACAGGTTAT CCTTCAGGGA
ATCAAGGAAG TCGAGCGCGA ACACATCTAT GGCGAATACA TGGATCGCGA GGGCGAACTG
GTCACGGCGA CCGTACAGCG CATGGCAAAG GGCAACGTCA TTCTCGAAAT GGGAAAAGCC
GAAGCCGTCT TGCCGCCGAA GGAACAGGTC GAGACCGATC GCTACTACCA CGGGCAGCGC
CTGAAGGTCT ACCTGATGGA AATCCGCCGT GAGGAACGCG GACCGAAACT GATCGCATCG
CGCGCGCACA AAAATCTGAT TACGCGCCTC TTCGAGATGG AAGTGCCGGA GATTTATAAT
GGCGCCGTCG AGATCAAGTC GATCGCGCGC GAGCCGGGTA TCCGTACCAA AGTAGCAGTC
GCGGCGCGGC AGGAGGGCAT CGATCCGGTT GGTTCGTGCG TCGGTATGCG CGGCATTCGC
ATTCAGAACA TCGTCAACGA ACTGAATGGC GAAAAGATCG ATGTTGTGCA GTGGTCGTCA
AATCCAAAAG AGTTCATTGC GAATGCACTG TCGCCAGCAC AGGTCGTTGA GGTGCAGTTG
CGCGACGATG AACACGCTGC GACGGTCATT GTGCCGGATA AGCAACTCTC GCTGGCGATC
GGTAAAGAAG GGCAGAATGT GCGCCTGGCG GCAAAACTGA CGGGATGGCG GATCGATATC
AAGAGCGCGT CGGCGTTGCT CGACGAAGAG CGCGCAGCGG CGGAGGCGCG CGATGCGGCA
GAAGCGGAGG CGCTGGCGAC TGAGGCGGCG CTGGCGACGG CAAAGGTCGA GATGCGCAAA
GTGTACGCCG ATGGAACGAT CGTCTATCGG AAGCATCGCT ATGGTCCACT CGGCGACGAC
CTGGTCGGCG AAACGGTGCA ACTGCGCGCG ACGCCGCAAA AACTGTACAT CTATCGCGGT
GATCGCCTGG TGGCATCGTA TATGCTCGTT GGCGACGATG AAGAGGATGC GATCGAGGGC
GACGAGTAA
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| Protein sequence | MKSDFYAAIS QIASERGIPK EAIVEVMEKA LATAYRRTLG PNPPPMEISV RLDPLTGAAR
VYSEKQVVDD VYDERFEIDL ESARKIKPDV ELGESVVVET TPKDFGRIAA QTAKQVILQG
IKEVEREHIY GEYMDREGEL VTATVQRMAK GNVILEMGKA EAVLPPKEQV ETDRYYHGQR
LKVYLMEIRR EERGPKLIAS RAHKNLITRL FEMEVPEIYN GAVEIKSIAR EPGIRTKVAV
AARQEGIDPV GSCVGMRGIR IQNIVNELNG EKIDVVQWSS NPKEFIANAL SPAQVVEVQL
RDDEHAATVI VPDKQLSLAI GKEGQNVRLA AKLTGWRIDI KSASALLDEE RAAAEARDAA
EAEALATEAA LATAKVEMRK VYADGTIVYR KHRYGPLGDD LVGETVQLRA TPQKLYIYRG
DRLVASYMLV GDDEEDAIEG DE
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