Gene Rcas_1121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1121 
Symbol 
ID5538587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1454375 
End bp1454533 
Gene Length159 bp 
Protein Length52 aa 
Translation table11 
GC content57% 
IMG OID640893255 
ProductFlp/Fap pilin component 
Protein accessionYP_001431238 
Protein GI156741109 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.458118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.932895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGCA GCTTTTTCGC CAAGGAAGAA GGTCAGGGTC TGGTTGAGTA CGCGCTGATC 
CTGGTGCTGA TCGCCATCGT CGTCATCGGT ATTCTCACCC TGCTCGGCAA CCGCGTCAGC
CAGGTCTTCA GCCAGATCAA CAGTGGTCTG AGCCGCTAA
 
Protein sequence
MVRSFFAKEE GQGLVEYALI LVLIAIVVIG ILTLLGNRVS QVFSQINSGL SR