Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1120 |
Symbol | |
ID | 5538586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1453563 |
End bp | 1454258 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640893254 |
Product | hydrolase |
Protein accession | YP_001431237 |
Protein GI | 156741108 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.546359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACACA AACTGATCCT GTGGGATATC GACGGTACCT TGCTGTACAG CGGCGGCGTC GCCGGTGAGG CGATGCGCGC CGCTATGACG CGCGTCTATG GTCGCTCTTC CGACAATGAG CGGCGCGCCT ACGCCGGTAA AACCGATCAA CAGATTATTC TCGAAACATT TCCCGACCGT CCAGCGGCGG AACTCCTCAG TCAACTGGAC GTGTTTACCG CAACGTACCT CGACATCCTC AGCGAATGGG CGGAGGCGTT TCGTACCCGT GGGCGCGTAC TCGAGGGAGT GGTTGACGTT CTGCGACGCC TGCGCGCTGA GGGTGTCGTT CAATCGCTGC TGACCGGCAA CCTTGCGCCG GTTGCCCGGC TTAAGCTCGA TCTGATGGGA ATTGCGGAGT TCTTCGATTT CGACAGCGGC GCGTATGGCA GCGACAGTCC ACGCCGGATC GACCTGGCGC CGATCGCGGC GGCGCGCGCG GCGCAGCGCC ATGGGCGCGT CTTTGCACAT GCCGACATTG TGGTCATTGG GGATACACCA AACGATATTG CCTGCGCGCG CGCGGCAGGC GCCCGCGCTG TGGCGGTTGC GACCGGTCCT TTCAGCATCG AGGAACTGCG CACTCACGCA CCTGATGCCG TCCTCCCCAG CCTCGCCGAT ACCGGGACGG CGCTGGCAGC AATTCTCGCT GAGTAA
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Protein sequence | MRHKLILWDI DGTLLYSGGV AGEAMRAAMT RVYGRSSDNE RRAYAGKTDQ QIILETFPDR PAAELLSQLD VFTATYLDIL SEWAEAFRTR GRVLEGVVDV LRRLRAEGVV QSLLTGNLAP VARLKLDLMG IAEFFDFDSG AYGSDSPRRI DLAPIAAARA AQRHGRVFAH ADIVVIGDTP NDIACARAAG ARAVAVATGP FSIEELRTHA PDAVLPSLAD TGTALAAILA E
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