Gene Rcas_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1120 
Symbol 
ID5538586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1453563 
End bp1454258 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content63% 
IMG OID640893254 
Producthydrolase 
Protein accessionYP_001431237 
Protein GI156741108 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.546359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACACA AACTGATCCT GTGGGATATC GACGGTACCT TGCTGTACAG CGGCGGCGTC 
GCCGGTGAGG CGATGCGCGC CGCTATGACG CGCGTCTATG GTCGCTCTTC CGACAATGAG
CGGCGCGCCT ACGCCGGTAA AACCGATCAA CAGATTATTC TCGAAACATT TCCCGACCGT
CCAGCGGCGG AACTCCTCAG TCAACTGGAC GTGTTTACCG CAACGTACCT CGACATCCTC
AGCGAATGGG CGGAGGCGTT TCGTACCCGT GGGCGCGTAC TCGAGGGAGT GGTTGACGTT
CTGCGACGCC TGCGCGCTGA GGGTGTCGTT CAATCGCTGC TGACCGGCAA CCTTGCGCCG
GTTGCCCGGC TTAAGCTCGA TCTGATGGGA ATTGCGGAGT TCTTCGATTT CGACAGCGGC
GCGTATGGCA GCGACAGTCC ACGCCGGATC GACCTGGCGC CGATCGCGGC GGCGCGCGCG
GCGCAGCGCC ATGGGCGCGT CTTTGCACAT GCCGACATTG TGGTCATTGG GGATACACCA
AACGATATTG CCTGCGCGCG CGCGGCAGGC GCCCGCGCTG TGGCGGTTGC GACCGGTCCT
TTCAGCATCG AGGAACTGCG CACTCACGCA CCTGATGCCG TCCTCCCCAG CCTCGCCGAT
ACCGGGACGG CGCTGGCAGC AATTCTCGCT GAGTAA
 
Protein sequence
MRHKLILWDI DGTLLYSGGV AGEAMRAAMT RVYGRSSDNE RRAYAGKTDQ QIILETFPDR 
PAAELLSQLD VFTATYLDIL SEWAEAFRTR GRVLEGVVDV LRRLRAEGVV QSLLTGNLAP
VARLKLDLMG IAEFFDFDSG AYGSDSPRRI DLAPIAAARA AQRHGRVFAH ADIVVIGDTP
NDIACARAAG ARAVAVATGP FSIEELRTHA PDAVLPSLAD TGTALAAILA E