Gene Rcas_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1105 
Symbol 
ID5538571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1431473 
End bp1431961 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content59% 
IMG OID640893239 
ProductDNA polymerase beta subunit 
Protein accessionYP_001431222 
Protein GI156741093 
COG category[R] General function prediction only 
COG ID[COG1708] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00137564 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGATA TCGATCTCCA GACCTTTCAG CAACGTGTTG CAGCGATTGC AGCCACGCAC 
CTACAGGTGC AGCTGGTGTA TCTCTTCGGA TCGCGCGCTG GTGGCGAGTT TGGTCCGATG
AGTGACATTG ATCTGGCGGC AGTGCTGGAT CGGGAGGCGT CTATTCCGCA CCTGCGCGAC
GAACTGGCGT ATCGCTTCGC AGAGGCGCTC AATGACGGAT CGGTTGATCT CATCATCCTG
AACCAGGCGC CAATTGAGCT GGCATACGCT GTCATTGCCG AGGGTAGAGC GCTCTACCAG
CGTTCCCTGG TTGAACGCAT CGAGTATGAG GCGGACGTGA TGAGCCGTTA CGGCGACTAT
CTGCCCGTGC TGCGGGCGCA ACGCTGGGAC ATTGTGCATG GATCTGGCGA TGAGCGTCGA
GTTCAGCGGT ATCGAGAGGC GTTTGGACGA ACTCAGCGAG CGCCTGGCGC GTCTGACCCC
GTTGCGTGA
 
Protein sequence
MFDIDLQTFQ QRVAAIAATH LQVQLVYLFG SRAGGEFGPM SDIDLAAVLD REASIPHLRD 
ELAYRFAEAL NDGSVDLIIL NQAPIELAYA VIAEGRALYQ RSLVERIEYE ADVMSRYGDY
LPVLRAQRWD IVHGSGDERR VQRYREAFGR TQRAPGASDP VA