| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1072 |
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| Symbol | |
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| ID | 5538538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1390002 |
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| End bp | 1390598 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640893208 |
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| Product | hypothetical protein |
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| Protein accession | YP_001431191 |
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| Protein GI | 156741062 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0344] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.205087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGACAA TCCCTCATCT GGCGCTGATA CTGATCGCGT ATCTTGCCGG CTCCATCCCG
TTCAGTCTGC TGGTGGCGCG TGCGCGGGGC GTCGATCTGC GCGTTGCGGG CAGCGGTAAC
GTTGGTGCAG CGAATGTCTG GCGCACCTGT GGCTTCGGTG CGTTTCTATT GGCCCTGAGC
GGCGACATGC TGAAAGGCGC GCTGCCGACC TTTGCAGCGC AAATGCTCAA TGTGCCGCCG
CTTGCGGTTG TGACCGTCGG TGCAGCAGCG ATGTTGGGGC ATGCCCGGTC GATCTTCCTC
GGGTTTCGCG GCGGCAAAGC AGTGGCGACC GGTGGTGGGG CGTTGCTGGC AATGGCGCCC
CTTGTTGCGC TCGCAGGGCT GGCTGTCTGG GGAGCGACGT TCAGCATCGT GCGCATTTCG
TCGGTGGCGT CGCTGGCAGC GGCCGCCGCG TGCGCTGTGG TGGCCGCCGT CTTCTTTGCC
CAGGGCGCAT TGCCGATGAC TTATGCGCTC TTTGTATGGG GCGCCGTGGT GTCGATTCTT
CTCCTCCACC GCGCGAATAT CCGGCGCCTG CGCGCAGGCG CCGAGAACCG CTTTTAG
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| Protein sequence | MLTIPHLALI LIAYLAGSIP FSLLVARARG VDLRVAGSGN VGAANVWRTC GFGAFLLALS
GDMLKGALPT FAAQMLNVPP LAVVTVGAAA MLGHARSIFL GFRGGKAVAT GGGALLAMAP
LVALAGLAVW GATFSIVRIS SVASLAAAAA CAVVAAVFFA QGALPMTYAL FVWGAVVSIL
LLHRANIRRL RAGAENRF
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