| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1058 |
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| Symbol | |
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| ID | 5538524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1373498 |
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| End bp | 1375459 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893194 |
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| Product | ABC-type dipeptide transport system periplasmic component-like protein |
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| Protein accession | YP_001431177 |
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| Protein GI | 156741048 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTC TCGACAGGAA ACTTGCGCTG GCGATGCTGC TGGCGTTGAT AGTTCCAATT
CTGGCAGCCT GTGGCGGCGG CGCGGCACAG GCGCCGGTCC GCGAAACGGT CGTGGTGACC
GCCGAGCCAA TCCGCGAAAC CGTGGTGGTC CGCGAGACGG TGGTGGCGGA AGCTCCTACG
GCGGCGCCAG CAGGGGCATT CACCACACCG CACCCGATTC TTGGCGACGT GCGCGTGCGT
CAGGCGATTG CCTACTGCAC CAACCGACCG GAACTGATCC AGTCGGTCTA TAGCTACCTG
ACGCCGGAGC AGCAGCAGGG GCTGCTGATG GACACCAACC TGCCCAAGAC GCACTGGGCG
GCGGCGAGCG AGGCGGACGG CATCGTGACC TATCCGTTTG ACCCGGAGAA AGGCAAGGCG
CTGCTCGATG AGGCGGGCTG GAAATTGGCA GAGGGCGCGA CTGTGCGCTC GAAAGATGGC
GTGCCGCTGT CGCTCGAGTT CACGACGACC AACGCACAGT TCCGTATCAC CTGGGCGACG
GTGCTGGAAA AACAGTTGCT GACCAACTGC GGCATCCAGA TCATCCGCAA GCACGCCCCG
GCATCCTGGT GGTTTGGTGG CGCCTCCGGT CTGCGTCGGC GCGATTTTGA GCTTGGCGCG
TTCGCATGGG TCGGCGAAGC GGATCCGGGC GGCCGCACGC TCTATGCCTG CGACCAGATT
CCGCTGCCAG AAAACAACTG GAATGGCCAG AACTACATGG GTTGGTGCAA TGAGACCGCC
AGCAAGGCGA TCACTGCAGC CAACAATACG CTGAACCGCG AGGAGCGCAT CAAGAACTAC
AAGGCGTTCC AGGTTGAGTT CACGAAGGAT ATGGTCAGCC TGCCGTTGTT CCAGCGCCTG
GAGGCGTATG CCTGGAATAA GGCGCTGAAG GGGTTGAAGC CTGACCCGAC CGAGTATATC
ACGGCCAACG CCTACGAGTG GGAGCGCAGC GATAATGGCG ACACCATTAT TCTGGGTTTC
ACCCAGGAGC CGGCTTCGAT GTTTACGCTG GTCGAGAGCG CGGCGGTGCA GCGCCAGGCG
GCGCAACTCG TCGAGGGCGT GTTGACGACC CAGTATAGCT ACGACTTCCA GGCGGTGCTG
CAGGATGGTC TCTCCACCAT TGAGAGCGGC AAGGCGAAGA ATGAGGTCGT TGAGGTCAAA
GAAGGCGATA AGGTCTGGGA TGTCACCGGC GCCGCAGTCG AACTCAAGCC GGGAGTGGAA
GTCGTCAACT CCGATGGCGA GACGGTCAAG TATGAGAGCG GCACGGTCAA GATGAACCAG
CTCACCGTCA CCTACGACCT CATCAAGGGG ATCAAGTGGT CCGACGGCGA GCCGCTGAAG
AAGGCGGACC TGGAACTGGC GGTGAAGATT GTCTGCGATC CTGAGTCGGG CAACGTCAGT
CTTACCTTCT GCGAGTCGCA CGACAATGCC AACGGTGTCA CCTTCAACAG CGACACCAGC
TACACGATTA AGTTCCTACC CGGTGTCCAG TGGCCAATCT ACTTCACGGC GCCGTATGGC
GGCTACCCCT CGCATGTGAC CATTTCGGAC GGGCGGAAGC TGGCGGATGT GCCGGCCAAG
GAGTGGGCGA CGCTGCCGGA GGTTGCTGAG TTGCCGCTGG GGTATGGTCC CTACATTCTG
AAGGAGTGGA ACAAGGGCCA GAATATGAAG TTCGAGGCGA ACCCGAACTT CGTCCTCGGC
GCTCCGAAGG TCAAGAATAT CGTGATCCAG TTCTATGCCG ACACCAACGC TGCCGTGGCG
GCGCTGCTGA CCGGTGAGGT CGATATTCTG GAGAAGGCGA CGCTCGGCGC CGGTCCTGAG
GTGGAGACGG TGCTCAAGGC GGCGGCGGAG GGCAAGATTG AAGCCAAGAC CGATGCCAGC
CCAACCTGGG AGCACATGGA TATGAACCTG TTTGTCCGGT AG
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| Protein sequence | MKILDRKLAL AMLLALIVPI LAACGGGAAQ APVRETVVVT AEPIRETVVV RETVVAEAPT
AAPAGAFTTP HPILGDVRVR QAIAYCTNRP ELIQSVYSYL TPEQQQGLLM DTNLPKTHWA
AASEADGIVT YPFDPEKGKA LLDEAGWKLA EGATVRSKDG VPLSLEFTTT NAQFRITWAT
VLEKQLLTNC GIQIIRKHAP ASWWFGGASG LRRRDFELGA FAWVGEADPG GRTLYACDQI
PLPENNWNGQ NYMGWCNETA SKAITAANNT LNREERIKNY KAFQVEFTKD MVSLPLFQRL
EAYAWNKALK GLKPDPTEYI TANAYEWERS DNGDTIILGF TQEPASMFTL VESAAVQRQA
AQLVEGVLTT QYSYDFQAVL QDGLSTIESG KAKNEVVEVK EGDKVWDVTG AAVELKPGVE
VVNSDGETVK YESGTVKMNQ LTVTYDLIKG IKWSDGEPLK KADLELAVKI VCDPESGNVS
LTFCESHDNA NGVTFNSDTS YTIKFLPGVQ WPIYFTAPYG GYPSHVTISD GRKLADVPAK
EWATLPEVAE LPLGYGPYIL KEWNKGQNMK FEANPNFVLG APKVKNIVIQ FYADTNAAVA
ALLTGEVDIL EKATLGAGPE VETVLKAAAE GKIEAKTDAS PTWEHMDMNL FVR
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