| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1047 |
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| Symbol | |
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| ID | 5538513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1362723 |
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| End bp | 1364984 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640893184 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001431167 |
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| Protein GI | 156741038 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.172621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGGCA TGGCGAATGT TCCGGTCGAA CCGCGTGCTG CCGCGCAAGC GCAGCGAATG
AGGACACACT GGCTACGGAT CGCGCCAGGG GCGCTGGCGC TGGCGTTGTT TCTGGCGCTG
GCGCTGGGGC GCGGCGTGCT CGGCGCCGTT GCGTCGCCGT TGCAGGGCGC GCTGGCGTTG
GCGTTGCTGG CATCGATCAT CGTGCAGCCG AGTGCGCTGG CGCGTATGCG TGTCACGCAA
ACCGCCGCGG CGTTGGCGGG CATCCTGACG GTCGCCTTGC TGCTGCGGGT TTGGGGCTTG
CGCTTTGGGT TGCCTTACTT CGAGCACCCC GATGAGTGGG CGGTTGCTGA GGAGGCGCTG
CGCATGCTGC GCACCGGTGA CTATACCCCC TTTTCGTATA CATACCCGAC GCTCTATACC
TATATGCAGG TCGGCGTGGC TGCCGCGCAC TTCATGTGGG GCGCAGGCGC CGGTCTCTAC
CGCTCCCCTG CCGACATCGA CCCGGTACCG TTCTATGTCT GGGCGCGCGC GCTGACGGCG
ATGCTCGGCG CGGGCGCTGT GGCGCTGACG TTCCTGGCGG GGCGGATGCT CTACGGCAAC
GCCGCCGGTC TGCTGGCAAC CGCGTTGATC GCCGTAATGC CCGCCGTCAC CGGCGATTCG
CACTATGTGA CAACCGATAC GCCGGCGATG TTTTTTACGC TGCTGGCATT TCTTGCGATT
GCCCGCCTTA CCGGTGTTGC AGCAGAGCGC ACTCCCTCAG ATGATGCGCC TCCCGCTACT
GCTCCCCCGA TCCTTACGCA GGCTTTCCTG GCAGGCGTCG GCGTTGGTCT GGCGACGGCA
ACCAAATGGA ATGCCGGCTC GCTCGTGATC GCGCTATTGG TCGCTATCGT CTTTGCGGCG
CGACGTTCAA CGCGCAATGG CCATGCTGAT GCTCTCGACG GCGACGTTGC ACTGCGACGT
CGCAACCTTC AACCCTTAAC CGTCAACCTT CTCACCGTTG CTCTTTCCGG TATTTTGTTG
GGTTTCACCC TCGGCGTGCC GTTCTGGTTG CGCGATCTGC CGCGCATTCT GACTGACCTT
GCCGGAATTA TCGCGCATTA TCGGTTTGAA GGGCATCCCG GCGCAGAATC GGATCAACCG
GCGCTGTTCT ACTGGTGGGC ATTGACCCGT GAAGGGACGC TGCTGGCATG GGTGTGCCTG
GGTGGTGTGG CGCTGGCGTT CCTGCGGCGT AAACCTGCCG ATGTGCTCGT GCTCGCCGTC
GTGGTTCCTG CGGTGCTGCA ACTGACTGGC GTCAAGGTGG TGTTCTTCCG CAATGCCATG
CCGCTGCTGC CGTTTCTCTG CATCCTGGCG GCGGCGCTGG TTGTCGTTGC CGTCGAATGG
GTGACTGAGC GACCTGGAGA AACAGGGGAT CGACTGACAG GCGGGCGGGC GTCTGTTGCG
TTCATGCGAC GGCTGGCGGG CAACCGCACG GTGCTGCTGC TGGCGGCAAC CGTCTTGCTG
GCGGCAGAAC CGCTGGCGCA GGCGATCCAC GATGAGGCGC TGCGCGCCCG CCCGACGACG
CGCATACTGG CGGGGGAATG GCTGGAAACG CGCGCGCAGG ATGGTGAGCG CATCTGGCTG
GAGGATAATA CGCTCATCCT TGTACCGCGT TTGCGCGCTG TTGGCGGCGA ACCGGCGGTA
CATCACGACC TGGCCTGGTA CCGCGAGCAG GGCATTCGTT TTGTAGTGGT ACACCTCGAC
CGCGAGACAG GCGCAGCGGC GCTGGCAGCC TTCGGTGAAC CGGCGGCGCG GTTTCTGCGC
GCTGGCGAGC GTCATGGTCC CGAACTGGCG ATTTTCGACA CTGGTGCACC GGATGCTGCT
GCTGAACCGC GCACGCCGTC GGGAGCGACG CTCGGCGCAG GCGCGATTGT GCTGGAGGGA
TACCGCCATC CGGGGCGCGC GCAGGCAGGC GGGGTGTTGT CGCTGGCGCT CTTCTGGCGC
GCGATGCGCC CGCCGCCGCT GGATTATACC GTGTATGTGC ACCTGGTTGA TGAAGCGGGT
GCGAAAGTCG CGCAGCGCGA CGTGCCGCCG CTCGAAGGAC GCCGCCCGAC CAGTCGCTGG
ATGCCTGGCG ATCGTGTGCG CGATGATCAG GACCTCTTTA TTCCTGAAAC CGTTCCGCCC
GGAACATACC GCCTGTTGAC AGGCATGTAT GACGCTGCAA CCATGACGCC GATCAACGAT
GCGGGACCGA TCGATCTGGG GGTGGTTGTG GTTGAACGTT GA
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| Protein sequence | MPGMANVPVE PRAAAQAQRM RTHWLRIAPG ALALALFLAL ALGRGVLGAV ASPLQGALAL
ALLASIIVQP SALARMRVTQ TAAALAGILT VALLLRVWGL RFGLPYFEHP DEWAVAEEAL
RMLRTGDYTP FSYTYPTLYT YMQVGVAAAH FMWGAGAGLY RSPADIDPVP FYVWARALTA
MLGAGAVALT FLAGRMLYGN AAGLLATALI AVMPAVTGDS HYVTTDTPAM FFTLLAFLAI
ARLTGVAAER TPSDDAPPAT APPILTQAFL AGVGVGLATA TKWNAGSLVI ALLVAIVFAA
RRSTRNGHAD ALDGDVALRR RNLQPLTVNL LTVALSGILL GFTLGVPFWL RDLPRILTDL
AGIIAHYRFE GHPGAESDQP ALFYWWALTR EGTLLAWVCL GGVALAFLRR KPADVLVLAV
VVPAVLQLTG VKVVFFRNAM PLLPFLCILA AALVVVAVEW VTERPGETGD RLTGGRASVA
FMRRLAGNRT VLLLAATVLL AAEPLAQAIH DEALRARPTT RILAGEWLET RAQDGERIWL
EDNTLILVPR LRAVGGEPAV HHDLAWYREQ GIRFVVVHLD RETGAAALAA FGEPAARFLR
AGERHGPELA IFDTGAPDAA AEPRTPSGAT LGAGAIVLEG YRHPGRAQAG GVLSLALFWR
AMRPPPLDYT VYVHLVDEAG AKVAQRDVPP LEGRRPTSRW MPGDRVRDDQ DLFIPETVPP
GTYRLLTGMY DAATMTPIND AGPIDLGVVV VER
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