Gene Rcas_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1028 
Symbol 
ID5538494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1341280 
End bp1342032 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content58% 
IMG OID640893167 
Productmethyltransferase type 11 
Protein accessionYP_001431150 
Protein GI156741021 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGCAG CGCTGACCAC ACGCCAACAG ATCGAGCGAA CACACCACGA CCTTGTCGCT 
TCCCGTGAAC GACGCGACTT TTATGCATGG GGCGCGCTCG ACATCGCCGA TGCATATGCC
TGTTCGCTGA TCGACTCCCC ACAGGGTAAG GTCATTCTTG ATCTTGGATG TGGCAGAGGC
GCTCATACGG TGCGCTTTGC GCAATCTGGA GCGCACGTTG CGGCAATTGA CCTGTCGCGT
GGTATGGTGA CTGTGACGCA ACAGCGCGTG ATCACCGCAG GGGTTGGCGA TCGTGTGGCG
GTTCAGCAGA TGAGCGCCGA GTCACTGGGA TTTGCCGACG CGACGTTCGA CTATGTGTTT
GGTCATTCTG TTCTGCACCA TACCGATCTG GCCGTGACCC GCCGGGAAGT GTGGCGGGTG
CTCAAGCCGG GTGGTCGAGC CGTGTTTCTT GAGCCGCTCG ACCACAATCC ACTGCTCAAC
CTGTTTCGCC GTCTGACGCC ATGGCGCCGA ACACCAACCG AAAAACCGTT GCGTTTGAGG
GATCTGGGTT TCTTTGCGGA ACCATTTGTG CACAGTTCAC ATTGCGAATT CTATCTTCTG
GCGCTCGGAG CATTCGTTTT TGTGCCATTG CAGAGGCGCG CGCTTTTTCA ACGTGCGCTA
CGCCTGCTGA ATGCGGTTGA TCAAAAGGTT TTCCGGCAGG TTCCTGCGTT GCGTCGCTAT
GCCTGGGTAA CGGTGCTGGA ACTGCGGCGC TGA
 
Protein sequence
MSAALTTRQQ IERTHHDLVA SRERRDFYAW GALDIADAYA CSLIDSPQGK VILDLGCGRG 
AHTVRFAQSG AHVAAIDLSR GMVTVTQQRV ITAGVGDRVA VQQMSAESLG FADATFDYVF
GHSVLHHTDL AVTRREVWRV LKPGGRAVFL EPLDHNPLLN LFRRLTPWRR TPTEKPLRLR
DLGFFAEPFV HSSHCEFYLL ALGAFVFVPL QRRALFQRAL RLLNAVDQKV FRQVPALRRY
AWVTVLELRR