Gene Rcas_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1020 
Symbol 
ID5538486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1330245 
End bp1330565 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content55% 
IMG OID640893160 
ProductDNA polymerase beta subunit 
Protein accessionYP_001431143 
Protein GI156741014 
COG category[R] General function prediction only 
COG ID[COG1669] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTG TCGATCACAT ACCGGAAATC GTTCGAAGGA TTGTTCAGGT CAGCAATCCT 
GTCAAAATCG TTCTGTTCGG TTCGCATGCA CGGAACGCCG CCGGTCCTGA CAGCGACCTG
GATTTGCTTG TCGTTCTCGC GCATTCCGAC CATCCGCGAC AGGATAGCTG GCGAATACGA
CGTGCTCTAC GCCGTTTGCT GGTCTCTGTC GATATTGTGG TCGCCACCAC CGAGCAGGTG
CAACGACTTG CTCAAACGCC GGGATTGATC TATCGTACTG CGCTGCAAGA AGGGACGGTG
CTGTACGAAC GCACCGGGTA A
 
Protein sequence
MKPVDHIPEI VRRIVQVSNP VKIVLFGSHA RNAAGPDSDL DLLVVLAHSD HPRQDSWRIR 
RALRRLLVSV DIVVATTEQV QRLAQTPGLI YRTALQEGTV LYERTG