| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1000 |
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| Symbol | |
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| ID | 5538466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1307187 |
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| End bp | 1310051 |
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| Gene Length | 2865 bp |
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| Protein Length | 954 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893143 |
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| Product | hypothetical protein |
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| Protein accession | YP_001431126 |
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| Protein GI | 156740997 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.330907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATGC AACGTCGATG GCAACCTGCG CTCAGAACGA TCCTGTCGTT CGTCTTGTGC
CTGCTGCTGT TCCTGATGTC TGCGCCGGCG CAGGCGCAGA CGCCGCTCCC GCCGCTGGTC
TTTGTGGCGC GCAGTCGTCT GGCGACCGGT GATTATCTCT TTCCACGCGA TGTCGGTCCG
GCAGGGCATT TGATCACCGG CATGACGAAA TTCGCGCCCG GATCGAAATT ACTCATCCGT
GATCAGGCAG GTCAGTTGCG TGTTCTGATC GATACGGCGC GACCGGCGGG TGATCCGCTG
AACCCGCTGG GGTTGCGCGA TGTGCAGTCG CCTGATGTGT CGTTCGATGC CCGCCGCATT
GTGTTTGCCG GCACGTTTGG ACCGGAAACG TTTCGCAATC AGCCGAACGG TCGCCCGTAT
TACTCGTGGC GACTGTTCGA GATCGGCGTC GATGGTCGTG GCTTGCGGCA ACTCACGCAC
TCTGATCGCG ACATTACGAT TCCTGAGGGA CCGGCAAATG CGGAGGCGTA TGCGTTCTAT
GACGATCTCT TTCCAGCATA CCTGGCGGAC GGGAGGATTG TCTTCAGTTC GTCGCGCTAT
CCGGCGCGTT CACCCTACGA TGGTCGGCGG TCATTCAATC TCTATATGAT CGACGGTGAT
GGCGGCAATA TGCGTCGCCT GACGACCGAG CGCTCTGCTG CGCTCCATCC GGCGCCGCTT
CCCGACGGCA GGATTGTCTT CAGTCGCTGG TGGGTCAATT TCAACCAGCC GAGTGAGCGC
GGTATTTACA ATCGCATCGA TAACCGCGCG GGCATGGAGA TTGCCCGTGA CCAGAGCGGA
CGCCCGATCA TGGTCGAACG ACGCATTCAG GTTGTCGAGA CGGCACCCCC TGCTCTGGCG
GCGTCACAAC CGACCGCGCC GCCGAAACCG ACGCCACTAC CGACCATTTC GTTTGTTGAG
AAGATCGATC CTGCAACCGG CAGCATCGTG CGCCTGACCA AGACTCCGGC TCCGCCGACG
CCAACGCCGC GCGCGCGACC GACTGCCACG CCAACCGCAG CGCTACCGGG TGGCACACCC
CGCACGATTG TCGTGGAACA GCCGATCACC GGGTATCGTC TGCCGGATGG GACGCTGGTC
TATTCCAACA CCAACACGAC CTTCAACCCG GCGCGTGGTC GGCTGGCGGA CGGCTTCCCC
ATCCGTGATG CGCCGAACAC CTGGCATCTG ATGGCAATCG AAGCCGACGG CAGCGGCATG
CGGCGCTTCG CCTGGACGCC GCGCTACGCA TCGGCGCTTA CGAATGATAG CGGCCTCGAT
ACGTACAACG CCGTGCAACC GGCGGTTGTG CTGTCCGGCG GCGAACTGCT GATAGCATAC
ACGACGCAGC GCGATCAGAC GATGGCGCAT TCGACGCTCT ATACCGGCGT CCGCGTTGCG
CGCCCCGGTA TCGAAAACAT GGCGCTGAAC ACCACCGAGT CGATTGCCGG GTATCGCTGG
GACGACGGAA CCGCTTTTCG CCCGCCGTAT GCGCTGGCGC CCGCCGGATT GCCTGACGGA
CGAATCATCT TCGCACAGAC CGCCGCCATT TCCGCACCGG CGCGAACCGG CACATACACG
GACACCCGCA ATGGGCGCAC GATCACGCTG CGGTTACAAT CGTCGTCGTT GCGCTACGAA
CTGCGCACCA TCTATCCGAA CGGCGCCCAA AACGAGGTTG TGCCGCTCGC CGGCCTCTCC
GATGACTACG ATGCCGTCGA AGCCAGACCA ATCGTGGCGC GTCCGGTCGG CGACGGACCG
GGCATGTGGC GTCTGCCGCG CGGGACGCCG CCGCCGGTCA GTGATGATCC GCTGGAAAGC
AATGTGCCGT TGGGTCTCCT CGACACGTTT GGCAACCCGG CGTATCCCTG GAGTCGCCGG
AGTATCCAGA GCGTCGAACT CGTCGCCGTG CGCAACGCCA ATGTCTATGC CAATCCGCCG
CTCGAATTGC CGTTCATTAA CAACTCGCCG CCGCCGGGGA GCGTGGCATT CGCCGACATC
TACATCGATG CCAATCAGTT TGGCGGCGCC ACATCGCGCG CTCCCAACCC GGACGATCAG
GCGCGCGCCG TCAAATGGTT GACCGTGCCG GTGAACCCGG ATGGGTCGTT CATCGCCTCT
GCGCCTGCCG ATGTGCCGAC GTTCATTGTG CTGCGCGACA AAAGCGGGCG GATTGTGCGC
GGCGGCAATC GTCACACCCT CAGCATCGCG CAAGGGAACT CCGCCGGCCG TCCCGGACAA
CCGATGTTCT GCATTGGTTG TCATATGGGG CACGCAAGCG GTTCCATCGC CAACCCGTCG
CTTGCCGAGC GCGGTTGGAC GAACATCGCT CCGGCGGCGT CCATTGCCGC ATCGTCATCC
ATCGAAAACG GCGCACCGGC GCGGATCAAT GACCGACGCG GATATGTGAC TGCACCCAAC
GGAACGCTCA TTGATCGCAC GCCGCCGTGG ACGGCGAACG GCGGTGCGGG GCAGTGGATT
CGGCTGGAGT GGCAACTGCC GATGGCAATC CTCGAAGTGC GTCTCGTCGG CGCGGAACCG
GGACAGGAAG GGCGCAGCGC CGATTACGAG GTAAGCGGCG AACTGCGCTT CTACCTGCGC
GGGCAGGAAC TTGGCGGAAC CGCCAGAAGC GTTGAAGCGG TCGCGCCGCT CTCGCGCGGT
GGGACTCTCA TTCGCCTGCC ACAACCCATC GCGGCTGACC GGGTTGAGTT TACGGTCACC
GCCGTGCGCG GTGCGCAACG CGGCGCACCG GCGCCCGCTG CGCTCAGCGA AATCGAGGTC
GCCGGTCAGG GCGCCACGCC GGATGCGCTC GGCGTCGGGC GTTAG
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| Protein sequence | MLMQRRWQPA LRTILSFVLC LLLFLMSAPA QAQTPLPPLV FVARSRLATG DYLFPRDVGP
AGHLITGMTK FAPGSKLLIR DQAGQLRVLI DTARPAGDPL NPLGLRDVQS PDVSFDARRI
VFAGTFGPET FRNQPNGRPY YSWRLFEIGV DGRGLRQLTH SDRDITIPEG PANAEAYAFY
DDLFPAYLAD GRIVFSSSRY PARSPYDGRR SFNLYMIDGD GGNMRRLTTE RSAALHPAPL
PDGRIVFSRW WVNFNQPSER GIYNRIDNRA GMEIARDQSG RPIMVERRIQ VVETAPPALA
ASQPTAPPKP TPLPTISFVE KIDPATGSIV RLTKTPAPPT PTPRARPTAT PTAALPGGTP
RTIVVEQPIT GYRLPDGTLV YSNTNTTFNP ARGRLADGFP IRDAPNTWHL MAIEADGSGM
RRFAWTPRYA SALTNDSGLD TYNAVQPAVV LSGGELLIAY TTQRDQTMAH STLYTGVRVA
RPGIENMALN TTESIAGYRW DDGTAFRPPY ALAPAGLPDG RIIFAQTAAI SAPARTGTYT
DTRNGRTITL RLQSSSLRYE LRTIYPNGAQ NEVVPLAGLS DDYDAVEARP IVARPVGDGP
GMWRLPRGTP PPVSDDPLES NVPLGLLDTF GNPAYPWSRR SIQSVELVAV RNANVYANPP
LELPFINNSP PPGSVAFADI YIDANQFGGA TSRAPNPDDQ ARAVKWLTVP VNPDGSFIAS
APADVPTFIV LRDKSGRIVR GGNRHTLSIA QGNSAGRPGQ PMFCIGCHMG HASGSIANPS
LAERGWTNIA PAASIAASSS IENGAPARIN DRRGYVTAPN GTLIDRTPPW TANGGAGQWI
RLEWQLPMAI LEVRLVGAEP GQEGRSADYE VSGELRFYLR GQELGGTARS VEAVAPLSRG
GTLIRLPQPI AADRVEFTVT AVRGAQRGAP APAALSEIEV AGQGATPDAL GVGR
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