Gene Rcas_0955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0955 
Symbol 
ID5538421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1262823 
End bp1263137 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content46% 
IMG OID640893103 
Producthypothetical protein 
Protein accessionYP_001431086 
Protein GI156740957 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0329499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATCC AAAACATTAT TGACGCTATC CGTCACAATC GTATTCGCAT CACTGAACAC 
GCTGACGAAG AAGCACAGGC AGATCATCTG TCCTTTGATG AGATTTTCTT CAGCATCCTG
CATGGAGAGA TTATTGAAGA CTATCCAACC GACAAGCCCT ATCCAAGTTG CTTGATATAT
GGAGATAGTT TTATCGGAGA GCCGATTCAC AGTGTTTGGG CTTACAATCC AGGAACCCAA
TGGGCTGTGT TGATCACTGT GTACCGACCT GATCCTGAAC GGTGGATCAA CTGGCGTATT
AGGAGAAAGC GATGA
 
Protein sequence
MDIQNIIDAI RHNRIRITEH ADEEAQADHL SFDEIFFSIL HGEIIEDYPT DKPYPSCLIY 
GDSFIGEPIH SVWAYNPGTQ WAVLITVYRP DPERWINWRI RRKR