| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0896 |
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| Symbol | |
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| ID | 5538362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1172581 |
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| End bp | 1173243 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640893046 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_001431029 |
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| Protein GI | 156740900 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.855031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCT TCGTCCGCAT CCGCGATATT CTGAGCGCCA ATATCAACGC CCTGCTCGAC
AATGCGGAAG ACCCTGAGAA AATGGCGAAT GAGTATCTGC GCCAGTTGCA CAACCAGGAG
TACGAGGTCA AGACCAATGT CGCCGCTGCG ATGGCGGACC TGGCGCGGCT CAATCGTATG
GAAGCGCAGT ATCTGGCTGA GGTTGAAAGT TGGGACCGCA AGGCCGAGGC GGCGTTGCGA
GCTGGCGATG AGTCGTTGGC GAAGGCTGCC CTGGCGCGCA AGGTGCAGGC GCAGAAACTG
TACGAGCAGT ACCGCGACCA GTCTGACGCG CAGGAGCAGC AGGTCGAGCA ACTGGAGCAG
GCGCTGGTGC AGTTGCAAAC GCGCGTCGCC GAAGTGCAGG CGAAGCGTGA TCTGATTATC
GCCAAGAAGA ACCGCGCCCA GACGCAGGAA GCAATCCAGC GCACGGTGCG CCAGGCCACC
CGTATCTCGG CGATGGACAA ACTGGATCAA CTCGAAAGTC GTGTTGATGA TCGCCTTGAC
CAGGCTGAAG CGATGGCGAA GCTCGAAGGT GATACACTGG AGAACAAGTT CCGCAACCTG
GAGCGTGATA CTGCGGTCGA TGCCGAGTTC GAGGAATTGA AGCGCCGGCT GGGACAGGGT
TGA
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| Protein sequence | MSIFVRIRDI LSANINALLD NAEDPEKMAN EYLRQLHNQE YEVKTNVAAA MADLARLNRM
EAQYLAEVES WDRKAEAALR AGDESLAKAA LARKVQAQKL YEQYRDQSDA QEQQVEQLEQ
ALVQLQTRVA EVQAKRDLII AKKNRAQTQE AIQRTVRQAT RISAMDKLDQ LESRVDDRLD
QAEAMAKLEG DTLENKFRNL ERDTAVDAEF EELKRRLGQG
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