Gene Rcas_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0890 
Symbol 
ID5538356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1165394 
End bp1165840 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content64% 
IMG OID640893041 
Productamino acid-binding ACT domain-containing protein 
Protein accessionYP_001431024 
Protein GI156740895 
COG category[S] Function unknown 
COG ID[COG3603] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0186832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGATC CACGCCTGCC TGACATCCTG CGACGTTTGC GCTGGTCGGT GTTGCCGGAA 
CGATACGTTC TCGCCGGGAT CGATCCACAC GAGTCGGCGG TGGTCATCCG CCTGCTTGGC
GGACTGCGCG CCCGGCTATG GCAGTTGTTC GTCGCTCCCG ACACGGTGAC TTTCATTCTG
CCCGAAAACG ATTGGCGCGC TGTCAGCCCG GCATTTCCGC GCGCTCGCAT CGAGCGCCCC
TACCGCGTCG TCAGTTTTGA GATCGATCTT CCGCCAGACC TGACCGGCTT CCTTGCCCTC
ATCAGCACTG CGCTGGCGGC GGAGTCCGTG CCGATTGTGG CAATTTCCGG TTTCAGCCGC
GATCATCTGC TGCTGCGCGA AGTCGATCTC GACCGCGCGC TGGCGGTGCT CGATTCGCTC
GTATCGTCCG CAGCGGCGGA AGGTTGA
 
Protein sequence
MHDPRLPDIL RRLRWSVLPE RYVLAGIDPH ESAVVIRLLG GLRARLWQLF VAPDTVTFIL 
PENDWRAVSP AFPRARIERP YRVVSFEIDL PPDLTGFLAL ISTALAAESV PIVAISGFSR
DHLLLREVDL DRALAVLDSL VSSAAAEG