Gene Rcas_0798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0798 
Symbol 
ID5538264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1042511 
End bp1043701 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content63% 
IMG OID640892950 
Productglycosyl transferase group 1 
Protein accessionYP_001430933 
Protein GI156740804 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.607654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTC TCATGCTCAA TAATGAGTTT CCGCCGCTCG GCGGAGGCAC AGGCACGGTC 
AACAAGGCGC TGTTGCAGCG TTTCGCCCGT GTCGCCGGTC TGGAGATCGA TCTGTTCACG
GCAGCATTGG GAAGCAGACC GGAACGTGAG CAGTTCAGCG AACGCATTCA GATCTATAAG
GTTCCGGTCA ATAACCGCGA TCTGCACCAC TCGTCGAACC GTGAGTTGCT GACCTATGCG
GCTGCGGTGT CGCCTGTTGC GCTGGCACGA CACCGCGCGA TGCCTTACGA CTTCTGCTTC
GCCTGGAGCG CCGTTCCTGC CGGCGGCGTG GCGTTGGCGC TCCGCCGCCT GACCGGATTG
CCCTACCTGG TGCGGGTGTG CGGACCGGAC ATTCCCGGCT TCGAGGAGCG GTACGGCTGG
CTATACCCGC TGCTGACGCC GTTCATCCGC GCGGTGTGGC GCAATGCGCG CCTGGTGGTG
GCAAAGTGCG ACGGCGAAGC CGCCATGATC CGCGCCGTTG ACCCTACAAT CACCCCAATG
CTTGTGCCGA ACGGGGTTGA TGTTGCGGCA TTTCACATCG CGTCGCTGCG CCCGCACGGT
CCATTGCGCA TCATCTGCGT GGCGCGCCTG ATTGAGCGCA AAGGACAGCG TCATCTCATC
GCCGCGTTGC GCCGTCTGCG CGACGCCGGC GTGGCAGCAA CCGTCGAGTT CGTTGGAACC
GGCGATGCTG AACAGACTTA CCGCGCCGAA GCGGAGCGCC TGCACGTCGC CGATCTGGTG
ACCTTCGCAG GGTATGTGCC GCGCGAGCGG ATTGCCGAAC ACTATGCGAA TGCCGACGTA
TTTGTGCTGC CATCGTACAA TGAGGGAATG AGCGTGGCGA CACTCGAGGC TATGGCTGCC
GGGTTGCCGC TTGTGGTCAC GCGCACCGGC GGAACTACAG AGCTGGTGCA GGAAGGTGTA
AACGGGCTGA CCTTCGCCTG GAGCGATGTC GAGACGTTGA CACAACACCT GACGTATCTC
GCCGCGAACC GTGATTATCT GCGGCAGATG GGCGCCGCGT CGCGGCAGCG GGCGGAACGG
ATGTCGTGGG AAGCAGTGGC GCAGCAGTAC CTGCCCATGT TTGAACAACT GGCGTCCAAA
ACAGCACGCC AACGTGCCGT CAGCGCGGCG AACGTGCTAC AATGTTCCTA A
 
Protein sequence
MRILMLNNEF PPLGGGTGTV NKALLQRFAR VAGLEIDLFT AALGSRPERE QFSERIQIYK 
VPVNNRDLHH SSNRELLTYA AAVSPVALAR HRAMPYDFCF AWSAVPAGGV ALALRRLTGL
PYLVRVCGPD IPGFEERYGW LYPLLTPFIR AVWRNARLVV AKCDGEAAMI RAVDPTITPM
LVPNGVDVAA FHIASLRPHG PLRIICVARL IERKGQRHLI AALRRLRDAG VAATVEFVGT
GDAEQTYRAE AERLHVADLV TFAGYVPRER IAEHYANADV FVLPSYNEGM SVATLEAMAA
GLPLVVTRTG GTTELVQEGV NGLTFAWSDV ETLTQHLTYL AANRDYLRQM GAASRQRAER
MSWEAVAQQY LPMFEQLASK TARQRAVSAA NVLQCS