Gene Rcas_0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0789 
Symbol 
ID5538255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1032445 
End bp1033239 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content66% 
IMG OID640892941 
Productmethyltransferase type 11 
Protein accessionYP_001430924 
Protein GI156740795 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAAC TCCTCGACTA TCCCACATAT GCCTGGCAGG TCTGGCGCGG CGCGCGTTCG 
CGCGGCGAAG CCGACCTGGA TCGCTGCCGA CGCGCGGATG TCGCCGGGTA TGTGGATTTT
TCCCGTCCGC TGACGATCCT CGACCTGGCG AATGGTCGTC TGCGCCCGCA GTACGCCATC
CTGCGCGCAC AGGGGCATCG GGTGGTCGGC ATCGATCTGG TCAATCGTCC TGTCACATCG
TGGAAAGCGC GCGCCTATGC GGTTGCGCGC GCGCTCTACG CCAAGCGGCT GCGGTTGCCG
CCAGCAGTGA TGCGCGCGAA TGCGCTGGTG TGCGGCGATG TCGGGCGCCT GCCGTTCCCG
GACGCAACCT TCGACCTGGT GACATCGGTG GCGGCATTCG AGCATTTTCT CGATGTTCCG
GCAGTGGTTG CGGAGGTGGC GCGGGTGCTG AAACCCGGCG GCGTGGTCTG GGCGGCGATC
CACGTCTTCA CCGCCCCGTC CGGCGGGCAC AACCTGAGTT TCGCCGAGGT GCCGCTGCGC
CACGTGCCGC CGGGAGTCGA CCCATGGGAT CACTTGCGGC GGCGTCAGTT GCCGTTTTCC
GTCCCGCTCA ACGAGTGGCG CATTCGCGAT TATCTTGCGG TGTTCGGGCG GCATTTCGAG
ATCATCCGCC ATTACTGCCA TATGCGGGAG GGCGAACATC TGCTGACGCC GGAAATCGAG
GCGGAACTTA CGGCGCGCGG CTACACCCGC GACGAACTGA CATGCGGCGC GTATGTGATC
GCGGCAAGAC GCTGA
 
Protein sequence
MPQLLDYPTY AWQVWRGARS RGEADLDRCR RADVAGYVDF SRPLTILDLA NGRLRPQYAI 
LRAQGHRVVG IDLVNRPVTS WKARAYAVAR ALYAKRLRLP PAVMRANALV CGDVGRLPFP
DATFDLVTSV AAFEHFLDVP AVVAEVARVL KPGGVVWAAI HVFTAPSGGH NLSFAEVPLR
HVPPGVDPWD HLRRRQLPFS VPLNEWRIRD YLAVFGRHFE IIRHYCHMRE GEHLLTPEIE
AELTARGYTR DELTCGAYVI AARR