| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0768 |
|---|
| Symbol | |
|---|
| ID | 5538234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 1005830 |
|---|
| End bp | 1006498 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640892923 |
|---|
| Product | methyltransferase type 12 |
|---|
| Protein accession | YP_001430906 |
|---|
| Protein GI | 156740777 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.215432 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAATC CGAAGAGATG GAAGTCTTTT TGGGATGTTC AGGTAACGCC TCTCCATTAT
GGTGATACAG AGGAGTGGTA TCGAAAGTTT GCCGAAGAGA TTAATGCTTT GATCGATACA
GCAGGATATG CGGGAGGACC AGTTTTGGAA AGTGGTTGCG GTAATGGAGC GCTTTTTAAG
TATCTTCTCA TTAACAAATC CGAGTATGTC GGAGTAGACT TTTCGAAACG AATGCTTCAG
ATATTTCGAT CTAGGTTTTC AGATGTCAAC TTGATATGCG CTGATGCAGC TGTTTTTTAT
GTTAATCGTC ACTTTGAACT TATATTTAGT AACGGGGTAG TCCAGTATTT TAACCACGCT
ATGATTCAGA GGTATGTGCA TAATTCCTTC CATATGTTGA AGAAAGGCGG AGTTTTGTTG
ATTGCGAACG TTCCTTGGAA AGATCTGAGA TCAGGCTATG TTTCGGGCAC CCTATACCAA
GAACCAGTAG TTGACAGTAG GCATAGGTTT ACTAGAAACT TACTATCTCT TCTTAAGGGT
GATGGTCTCG GTTATTGGTA CAATCCGCAA GATTTTTTTG GTTTTTCACG CCTAGGTTTT
AGGGTAACCC TCTTTGGATC GTTATATCAT CCATACAGGT TCTCAATATC CCTCAAAAAG
GAGTTCTAG
|
|---|
| Protein sequence | MINPKRWKSF WDVQVTPLHY GDTEEWYRKF AEEINALIDT AGYAGGPVLE SGCGNGALFK
YLLINKSEYV GVDFSKRMLQ IFRSRFSDVN LICADAAVFY VNRHFELIFS NGVVQYFNHA
MIQRYVHNSF HMLKKGGVLL IANVPWKDLR SGYVSGTLYQ EPVVDSRHRF TRNLLSLLKG
DGLGYWYNPQ DFFGFSRLGF RVTLFGSLYH PYRFSISLKK EF
|
|---|
| |