Gene Rcas_0762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0762 
Symbol 
ID5538228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp997620 
End bp998033 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content49% 
IMG OID640892918 
Producthypothetical protein 
Protein accessionYP_001430901 
Protein GI156740772 
COG category[S] Function unknown 
COG ID[COG2445] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.120748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAGGC CCGACGTGAT CCGCAAGAGA CTAGAGAAGC TTGATGAGTA TCTGGCTATC 
CTCCGCCAGT TGCAACGATA TTCGTGTGAT GAATTTGTCG CCAACCCCGA ACGGTACGGG
AGTGCAAAGC GTTTTCTTCA ACTGGCGATT GATTCGCTCA ATGATGTGGG GAATCACGTC
GTTGCAGAGG CAGGTTTGGG AACTGTCGAT TGGTATAGCG ACATCCCTCA TCGATTGCGT
GAGGCGGGTT TGATCGACTC ATCCCAAGAA GAAACCTGGA TCAGAATGAT TGGGTTACGC
AATATCCTTG TGCATGACTA TCTGAAGATC GACCGAACTA TTGTTTTCCG TGTTCTGCAA
GAAAATCTCG GTGATCTGGA AGGGTTCAAG CAGGTCTTTG CGCAATTTCT GTGA
 
Protein sequence
MVRPDVIRKR LEKLDEYLAI LRQLQRYSCD EFVANPERYG SAKRFLQLAI DSLNDVGNHV 
VAEAGLGTVD WYSDIPHRLR EAGLIDSSQE ETWIRMIGLR NILVHDYLKI DRTIVFRVLQ
ENLGDLEGFK QVFAQFL