Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0758 |
Symbol | |
ID | 5538224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 992137 |
End bp | 993252 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640892914 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001430897 |
Protein GI | 156740768 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.11154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCATCC TGACGCTCAA TTATGAGTAC CCGCCGCTTG GCGGCGGCGC CAGCCCGGTG ACGCGCGCGT TGTGTGAGCA TCTCGCCGCA GTCGGGCACG AGGTCGATGT CGTGACGATG GGGTATCAGC ATCTGCCGCA GTTTGAGATA TCCGGCAGGG TGCGCGTCAT CCGCGTCCCG GCGTTGCGTC GCTCGATGGT GCGCGCCGAA ACCCCTGAAC TGCTGAGTTA CATCGCTTCG GCGCTGCTGC CAACGCTGGC GCTCACACAG CGCCGGCGCT ACAATGTGGT GCATGCCCAT TTCATCGTGC CAACCGGCAT CCTCGCGGCT GCGGTTCGTC GCGTCAGCGG GTTGCCGCTC GTGATTACTG CGCACGGGTC GGATGTGCCG GGATACAACC CGGATCGCTT CACCCGCGGG CACCGATTGA TCGCTCCCGT CTGGCGCGTC GTTGCGCACA GCGCCGATGT GATCGTTTCA CCATCTCATT ACCTGCGCGC GCTGATACAG CGCACATGCG AGCGACCGGT CGAGGTGATT CCCTACGGCT TCGACCCGCC TCCTGTTCGC ATCAGCAAAC GAAAACGACG CATCCTGTTC GTCAGCCGAT TGTTTCCACG CAAAGGCGCG CACTACCTGC TCGAAGCGCT GGCGGGATTG CCGCTCGACG GGTGGGAGAT CACGATTGCG GGTGATGGAC CGATGCTGGA GGCATTACAG GCGCAGGCGC AGCACCTCGG TCTTTCCGTC GACTGGCGTG GGTTCATCAA GGGCGCGCCG CTCGACGAGT TGTATGCCAG CAGCGCCATT TTCGTCTTCC CCTCGACGAA CGACAACTTT CCGGTGGTGC TGCTCGAAGC GCTGGCCGGC GGGTGCGCCG TGATCACCAC GAATATCAGC GGCATGCCGG AGGTCGTGGG AGATGCGGGC ATCCTGGTTC CGCCGCAAGA CGTGCCTGCG TTACGCGATG CAATCCGGCG ACTGATGAAC GATGACGATC TGCGCGCCGA CCTAAGCGCG CGGGCGCGCG CGCGGATCGC CCATTTTGCC TGGGACAATG TGATACGGCG GTATCTGGAG GTGTATCAAG GGGCGGGAGT TTATGGAAAC GTTTGA
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Protein sequence | MRILTLNYEY PPLGGGASPV TRALCEHLAA VGHEVDVVTM GYQHLPQFEI SGRVRVIRVP ALRRSMVRAE TPELLSYIAS ALLPTLALTQ RRRYNVVHAH FIVPTGILAA AVRRVSGLPL VITAHGSDVP GYNPDRFTRG HRLIAPVWRV VAHSADVIVS PSHYLRALIQ RTCERPVEVI PYGFDPPPVR ISKRKRRILF VSRLFPRKGA HYLLEALAGL PLDGWEITIA GDGPMLEALQ AQAQHLGLSV DWRGFIKGAP LDELYASSAI FVFPSTNDNF PVVLLEALAG GCAVITTNIS GMPEVVGDAG ILVPPQDVPA LRDAIRRLMN DDDLRADLSA RARARIAHFA WDNVIRRYLE VYQGAGVYGN V
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