| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0753 |
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| Symbol | |
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| ID | 5538219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 986316 |
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| End bp | 988295 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640892909 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_001430892 |
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| Protein GI | 156740763 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3463] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.844921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0837231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTG AACCTCATCC GTCTCTCCGC GATCCTTTCC TCTGGATCGC GCTCCTGCTG
ATCGGCGGCA TGCTCGGCTG GTTGAGCGTG GCACGCTACG AGGGCTTCAA CGCCGGCATG
TACGATCTGG GCAACATGGC GCAGTCCATC TGGAGCGCGA CGCGCGGCGA GCCGCTGCTC
TACTCCCGCC CTGAAGGATC GCGTGCGTCA CGCCTGGCCG GGCATGTCGA GGTCGGCTAC
TTTTTGTTTG CACCTTTCTA TGCGCTCTGG CCCGATCCGC GCATGCTGCT GGTCGCCCAG
GCGGCGCTCT TTGCCCTCGG CGCCATCCCG GTGTACCGTC TCGCCTGGCG ACGCCTCGAT
GCGCCGTACA GCGGAGAACG GGCTATGCCG TATGCGGCGC GCTGCCTGAC ATTGATCTAT
CTGCTCTACC CAACCGCGCA GACGAGCGTG CTCTTCGATT TTCACGCTGA TACGGTTGCG
GCGCCGCTGA TTCTGTTGGC GCTTGATGCG CTCGATGTGC GCTCCTGGCG CCGGTTCGCG
CTCTGGACGG CGCTGGCGCT CAGTATGAAG TTCTATGTCG CAGCACTGGT CGTTGGCATC
GGTGTTGTGG TGTGGTTGTG GGAAGAACAA CGCCGCGCCG GGATGCTGAC TACCCTCGCA
GGCGGCGTCT ACGGCGCGCT GGCGTTCTTC GTCATTCGAC CGTTGTTTGC CACACAATCG
GCTGGCGGCG CCGCCGAGAT CACCGGCAAC TATCTGGCGT ACTATTTCGG CGCGATCCAC
GAAATTGCGG CGACCCTGCC CGACCGCCTG CTCAACGCTG TGGTGGTCTT CGGTCCGGCG
CTGCTCGTTG CGTGGCGCGG TTGGCGCTGG CTGCTGCCCG GGTTGCCGCT GGCAGGCGCC
ATGCTTATTT CCACCGGTCC TGGCGGCGCC TTCGACTATC GCTACCACCA TTATGCGCTG
GTCGCGCCCT TCCTTGTGAT GGCGACAATC GATGGCGCAG CGCGCATGCA ACGCACGACG
CCATCGCTCC CTGGCGAGCC GCGACATCGG GGACGATCCT GGCGCGGCGA TCTTGGCTTC
ACCGTGGCGG TAACGGCGAT CTTCAGCGCG TTGCTGGTCA ATACTCCGCT CAACCCTTTG
TTCTGGATCG GTGCGCCCGG CTATGGCTTC GACCGGTCGG TCTACGGCGT CACTCCGCGC
GATGCGCGCC TGGCGGCGTT CCTGACGACC CGTGTGCCGC CCGATGCGCC TCTCGCGGCT
TCCACCTTTG TCGCAACACA CCTGGTGAAC CGCGAAACGG TCTATCTGGT GCGCTACCCG
TTCGAGGCGC GCCCCGAACA CTTGCCCGAC CTGCTGCCGC AGGTGCAGTA TGCGCTGCCC
GATGCTCTGT TCGACTGGTA TCTGCAACTC GACGATGGGT ATGGCGGCGG TCTCGATTAC
GACCGCGAAG CAATTGCCAT CCTGCTACGC GATCCGTCAT TCGCGCTGGT GGACATGGAA
GATGGACTGC TTCTCTTTGA ACGCGATGCC GATTCCGGTC ACGCGCTGGT CAATCGTGTA
TCGGTTGTGG ACGACAATGG CGCCTCTGTC TTGCAGCAGT TCGGTCCGTT CGATCTGGTG
CGCGCGAATA TTGAGGTTAT TGGTGAGCGG CGATTGCGTG CTTCCTTCGC GTGGCGAGTG
CGTGCGGCGC TGCCGCCAGG GGTGAAGTTC GTTGCGGTGA GCCGGCTGGA TGGCGCGCCG
GGAGCGCGGT TTGTCCATCT CCCCGGCTAC GCGCTGCATC CGGTATGGGA ATGGTCGGCA
GGAGACGTGA TCGAAGAGAC CTTCGATGTG CTCGTGCCGC CTGATACTCC GCCGGGGCGC
TATGCCTGGC GCGTTGGATG GTACGATGTG CGTCACCCGG ATGCGACATT GACCGATGAG
CGCAGTCGAA TGGCAGGAAC TGCCGAATAT GTGGTGACGT TCATTGAAGT GACGCCGTGA
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| Protein sequence | MSAEPHPSLR DPFLWIALLL IGGMLGWLSV ARYEGFNAGM YDLGNMAQSI WSATRGEPLL
YSRPEGSRAS RLAGHVEVGY FLFAPFYALW PDPRMLLVAQ AALFALGAIP VYRLAWRRLD
APYSGERAMP YAARCLTLIY LLYPTAQTSV LFDFHADTVA APLILLALDA LDVRSWRRFA
LWTALALSMK FYVAALVVGI GVVVWLWEEQ RRAGMLTTLA GGVYGALAFF VIRPLFATQS
AGGAAEITGN YLAYYFGAIH EIAATLPDRL LNAVVVFGPA LLVAWRGWRW LLPGLPLAGA
MLISTGPGGA FDYRYHHYAL VAPFLVMATI DGAARMQRTT PSLPGEPRHR GRSWRGDLGF
TVAVTAIFSA LLVNTPLNPL FWIGAPGYGF DRSVYGVTPR DARLAAFLTT RVPPDAPLAA
STFVATHLVN RETVYLVRYP FEARPEHLPD LLPQVQYALP DALFDWYLQL DDGYGGGLDY
DREAIAILLR DPSFALVDME DGLLLFERDA DSGHALVNRV SVVDDNGASV LQQFGPFDLV
RANIEVIGER RLRASFAWRV RAALPPGVKF VAVSRLDGAP GARFVHLPGY ALHPVWEWSA
GDVIEETFDV LVPPDTPPGR YAWRVGWYDV RHPDATLTDE RSRMAGTAEY VVTFIEVTP
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