Gene Rcas_0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0728 
Symbol 
ID5538193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp951804 
End bp952376 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content55% 
IMG OID640892883 
Productresponse regulator receiver protein 
Protein accessionYP_001430867 
Protein GI156740738 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCG ATTGTGCGTA TCTTCTTGAG GCGCACGAAC GGTTTCTCTA CGTAGCGCCC 
AACGCCGTCG TCGTCCTGAT GATGTATCCT TCGTTGCTCC CCGTCTACAA AGCGTTGGGC
GCTATGAATG ATGATGGTTG TGACAACATC TGGGCGGACA GGAGACGTGC GATGAAAGAG
GTGCGCCAGG GAAGGATTCT GGTAGTGGAA GAGGACTACG ATCTGGGACG ACTCTTTGAG
GCGATGCTCA GCATCGAGGG ATACCACGTC ACCGTAACCC GTCATCCTGA TGAAGCGCAC
CGCCTCCTCC CTCAACTCGA ACCGAACCTG ATCGTCTTCG ACTGGTCGTT TCACAATACC
AGAGGCTACG TATGGATTGA TGAACTGCGC ACCTCGAACC ACACGGCGCA CATCCCGGTG
TTGCTGGTCT GCGGTGCGCC GCCGCCGCGC AGTATCTATG AAATGTTGGC GAATGCGGGT
GTGCCGATCA TCGAAAAGCC ATTCGATCTG ATCGCATTTA ACCGTTGTAT TGCAGCGCTT
ATGCATTCAC GAGAACGCGC CATCGGCGCG TGA
 
Protein sequence
MNPDCAYLLE AHERFLYVAP NAVVVLMMYP SLLPVYKALG AMNDDGCDNI WADRRRAMKE 
VRQGRILVVE EDYDLGRLFE AMLSIEGYHV TVTRHPDEAH RLLPQLEPNL IVFDWSFHNT
RGYVWIDELR TSNHTAHIPV LLVCGAPPPR SIYEMLANAG VPIIEKPFDL IAFNRCIAAL
MHSRERAIGA