| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0565 |
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| Symbol | |
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| ID | 5538028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 753636 |
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| End bp | 754709 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892726 |
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| Product | band 7 protein |
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| Protein accession | YP_001430712 |
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| Protein GI | 156740583 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0849672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATC GTAAACGCCA GAACCAGCCA TCGACACAAC AAGGAGGAAG AGGCATGAAT
GTTGCAGGGC GGACTATCGC CATTGTGTTT GCGCTGTTGA TCATCGTTGG ATTGGGAGCG
GCGACCGCGC GCTTTGTGCA GGTGGACGAA GGGCAACGCG GGATCATCAT CACCAGCGGT
GCGGTTGAAG GCGTGCAGGA ACCGGGTGTC TTCTTCCGTC CGTTTGCGCC GCTGACGCGC
GTCGAGATTG TGAACGTCCG CCGTCAGACG CTCCAGATCT CGCAGAATGT CGCCAGCAGT
GACAAGCAAC TCTACGATAT TGATATTCAG ATCGACTTCA GCCGGAAGAC CGATCCTGAG
TCACTGCGCC AGATGTATGC GCGCCTCGGC GCTGAAGACG ATCTCCTCCG TCTGCAACTC
GAAGGTTTCG CCTCCGATGC GCTGAAGAGC GCCAGCACGC AGTTCACGCT CGACCAGGCG
CTCTCCGACC GCGGCGGGTT TTCCCAACGT ATTCGCGCGA ATCTGACGTC GCCGCCCGGT
CCCGGACAGC AAAGCCCTGC CGATCAACTG TTTGTTGTTA TCGAGGCGGT GAAGGTGCTC
GATATTAAGG TCAGTGAAGA ATATGCCCGC CTCCTCTCCG AAAAGGCGAA CCTGGAAGTC
AAGATCGAAA CGGAGGAGCG CCGCCGCCAG CAGATCGAAG CGGAACAGGC AAACAATCTG
TTCCAGGCGG AGCAAGAAGC GCGCGTGGCG CTGACCCGTG AAAAGGGGCA AACGGCGGCG
GCCCTCGAGG CGGCGAACCG CGAGGCGCAG GTGCGCGCAA TCCAGGGACG CTACTGGCGC
GAGAACCCGG AACTGTTCGA ATTACGCACG CGTGAGTTGA TGGTCGAAAT GCTGAAGAGC
GGCAATATCT GGTTCATCGA TCCCAATACC AACATTACCC TCTTGTTGAA CCAGATGGCA
ACCGGCACAA CGGTCGTGCC CAACCCGTCG TCGGGGCAAC GGACATCGAC ACAACCATCG
CAGCCTGCGA CGCCTGAGCA ACCGGCGGCG CCGACGACGC CAACGACGCC GTAA
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| Protein sequence | MSDRKRQNQP STQQGGRGMN VAGRTIAIVF ALLIIVGLGA ATARFVQVDE GQRGIIITSG
AVEGVQEPGV FFRPFAPLTR VEIVNVRRQT LQISQNVASS DKQLYDIDIQ IDFSRKTDPE
SLRQMYARLG AEDDLLRLQL EGFASDALKS ASTQFTLDQA LSDRGGFSQR IRANLTSPPG
PGQQSPADQL FVVIEAVKVL DIKVSEEYAR LLSEKANLEV KIETEERRRQ QIEAEQANNL
FQAEQEARVA LTREKGQTAA ALEAANREAQ VRAIQGRYWR ENPELFELRT RELMVEMLKS
GNIWFIDPNT NITLLLNQMA TGTTVVPNPS SGQRTSTQPS QPATPEQPAA PTTPTTP
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