| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0535 |
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| Symbol | |
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| ID | 5537998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 714142 |
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| End bp | 714810 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640892697 |
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| Product | hypothetical protein |
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| Protein accession | YP_001430683 |
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| Protein GI | 156740554 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCATC CTGCCTTCGC ATTTTCTGAA GAATCATTTG CTACAGTCGT GCCAGAGAAA
TCGATAATAG AAAGGCTGGA TATGCAGGCG ACATCTTCTG TTCCACATGC AGGCGGCGTT
CAGCGGCAGC GGCTGTCTCG ACGCCGGATG CTCTGGATTG TGTTGCTGTT GCTGATTCTT
GTCGGCATCG GCGGGATCGC ATGGCGCGCC ACAACGGTTG CTCCCGTCCC GGCGGCAACG
GCGCCGGTGT TGCGGGAAAC GCTGACGGAA ACGGTCAGCG GCAGCGGTTC GGTGCAACCG
GCGCGCGCAC TCGATGTGGT CTTTGTCGCA TCGGGCGAAG TCGCTGAGGT GCTGGTCGAA
GTTGGCGATG TCGTGCGCGC CGGGCAGTCG CTGGCGCGCC TGGACACAAC GGAACTGGAA
TTGCAACTGG CGCAGGCGGA GGCAAATCTG AAATCGGCTG AAGCGCGCCT GGCAGCCGCG
CGCGGGGAAG GCGCATCGGA ACTGGATATT CGCCAGGCGC AACTGTCGCT TCAGGCTGCC
GAGATTCAAC TGGCGAAGGT CAGCAAGGGC AATGCCACTG CTGCCAACAT TCGTAGCGCG
CAAGCAAATC TCGAGTCGGC GCGCGCGCCT TGCAGTGCGG TTGGCGGGGT GGCTGCGGCT
GATGGCTAG
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| Protein sequence | MIHPAFAFSE ESFATVVPEK SIIERLDMQA TSSVPHAGGV QRQRLSRRRM LWIVLLLLIL
VGIGGIAWRA TTVAPVPAAT APVLRETLTE TVSGSGSVQP ARALDVVFVA SGEVAEVLVE
VGDVVRAGQS LARLDTTELE LQLAQAEANL KSAEARLAAA RGEGASELDI RQAQLSLQAA
EIQLAKVSKG NATAANIRSA QANLESARAP CSAVGGVAAA DG
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